GenSpectrum

- Proteins & Proteomes
- Genes & Genomes
- Structural Biology

- Database

ViralZone

Fact sheets about viruses linked to sequence databases

- Glycomics

- Database

SugarBind

Pathogen Sugar-Binding Database

- Population genetics
- Genomics

- Software tool

V-pipe

Viral genomics pipeline

- Evolution & Phylogeny
- Genes & Genomes

- Software tool

BEAST2 - COVID-19 Monitoring

Epidemiological dynamics in real-time

- Text mining & Machine learning

- Software tool

Computational Linguistics for COVID-19

Central hub in computational linguistics for COVID-19

- Population genetics
- Genomics

- Software tool

V-pipe SARS-CoV-2

V-pipe pipeline for SARS-CoV-2 sequencing data

- Text mining & Machine learning

- Software tool

COVTriage

Rank the COVID-19 literature according to COVoc ontology

- Genes & Genomes

- Database
- Software tool

SPSP | Swiss Pathogen Surveillance Platform

A secure NGS One-health online platform

- Genomics
- Evolution & Phylogeny

- Software tool

Nextclade

Clade assignment, mutation calling & QC for virus sequences

- Evolution biology
- Genes & Genomes

- Software tool

BEAST2

Bayesian evolutionary analysis by sampling trees

- Evolution & Phylogeny

- Database

OrthoDB

Ortholog evolutionary and functional annotations

- Evolution & Phylogeny

- Database

OrthoDB SPARQL endpoint

SPARQL access to the OrthoDB catalog of orthologs

- Glycomics
- Proteins & Proteomes

- Database

GlyConnect

Integrated data platform to study glycosylation

- Evolution biology
- Genomics

- Software tool

Nextstrain

Impact of pathogen genome data on science and public health

- Genomics
- , Transcriptomics
- Evolution biology

- Software tool

BUSCO

From QC to gene prediction and phylogenomics

- Evolution & Phylogeny

- Software tool

OrthoLoger

Accurate and scalable inference of groups of orthologs

- Metagenomics
- , Genomics
- , Genes & Genomes

- Software tool

mVIRs

Prediction tool for inducible, bacteria-infecting viruses

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