NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC BAA-125 / C-125 / DSM 18197 / FERM 7344 / JCM 9153;
DOI=10.1093/nar/28.21.4317; PubMed=11058132 [NCBI, ExPASy, EBI, Israel, Japan]
Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F., Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.;
"Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis.";
Nucleic Acids Res. 28:4317-4331(2000).

Comments

CATALYTIC ACTIVITY: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.
PATHWAY: Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose 1-phosphate: step 2/2 .
SUBCELLULAR LOCATION: Cytoplasm (By similarity).
SIMILARITY: Belongs to the deoC/fbaB aldolase family. DeoC type 1 subfamily.

Copyright

Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.

Cross-references

Sequence databases

EMBL

BA000004; BAB05071.1; -; Genomic_DNA.

[EMBL / GenBank / DDBJ] [CoDingSequence]

PIR

H83818; H83818.

RefSeq

NP_242218.1; -.

3D structure databases

HSSP

Q9X1P5; 1O0Y. [HSSP ENTRY / PDB]

ModBase

Q9KD67.

Enzyme and pathway databases

BioCyc

BHAL272558:BH1352-MON; -.

Ontologies

GO:0005737;	Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004139;	Molecular function: deoxyribose-phosphate aldolase activity (inferred from electronic annotation from HAMAP).
GO:0016052;	Biological process: carbohydrate catabolic process (inferred from electronic annotation from HAMAP).
GO:0009264;	Biological process: deoxyribonucleotide catabolic process (inferred from electronic annotation from InterPro).
QuickGo view.

Family and domain databases

HAMAP

MF_00114; -; 1.
PBIL [Tree]

InterPro

IPR013785; Aldolase_TIM.
IPR011343; DeoC.
IPR002915; DeoC/AroFGH_arch.
Graphical view of domain structure.

Gene3D

G3DSA:3.20.20.70; Aldolase_TIM; 1.

PANTHER

PTHR10889; DeoC; 1.

Pfam

PF01791; DeoC; 1.
Pfam graphical view of domain structure.

PIRSF

PIRSF001357; DeoC; 1.

TIGRFAMs

TIGR00126; deoC; 1.

Genome annotation databases

892275; -.

BA000004_GR; BH1352.

bha:BH1352; -.

fig|272558.1.peg.1352; -.

Phylogenomic databases

HOGENOM

Q9KD67; -.

Genome annotation databases

CMR

Q9KD67; BH1352.

Other

ProtoNet

Q9KD67.

UniRef

View cluster of proteins with at least 50% / 90% / 100% identity.

Keywords

Complete proteome; Cytoplasm; Lyase; Schiff base.

Features

Feature table viewer

`Key`	`From To`	`Length`	`Description`	`FTId`
`CHAIN`	`1 224`	`224`	`Deoxyribose-phosphate aldolase.`	`PRO_0000057223`
`ACT_SITE`	`155 155`		`Schiff-base intermediate with acetaldehyde (By similarity).`
`ACT_SITE`	`184 184`		`By similarity.`

Sequence information

Length: 224 AA [This is the length of the unprocessed precursor]

Molecular weight: 23362 Da [This is the MW of the unprocessed precursor]

CRC64: 5CC79183BB424502 [This is a checksum on the sequence]

        10         20         30         40         50         60 
MSRSIAQMID HTLLKPNTTE DQIVKLCEEA KEYSFASVCV NPTWVALAAQ LLKDAPDVKV 

        70         80         90        100        110        120 
CTVIGFPLGA TTPEVKAFET TNAIENGATE VDMVINIGAL KDKQYELVGR DIQAVVKAAE 

       130        140        150        160        170        180 
GKALTKVIIE TSLLTEEEKK AACELAVKAG ADFVKTSTGF SGGGATAEDI ALMRKVVGPN 

       190        200        210        220 
LGVKASGGVR DLSDAKAMID AGATRIGASA GVAIVNGERS EGSY

Q9KD67 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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	BLAST submission on ExPASy/SIB or at NCBI (USA)		Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
	ScanProsite, MotifScan		Submit a homology modeling request to SWISS-MODEL
	NPSA Sequence analysis tools