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UniProtKB/Swiss-Prot entry Q9FJ80


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name P2A14_ARATH
Primary accession number Q9FJ80
Secondary accession numbers None
Integrated into Swiss-Prot on January 23, 2007
Sequence was last modified on March 1, 2001 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 42)
Name and origin of the protein
Protein name F-box protein PP2-A14
Synonyms Protein PHLOEM PROTEIN 2-LIKE A14
AtPP2-A14
Gene name
Name: PP2A14
OrderedLocusNames: At5g52120
ORFNames: MSG15.23
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1093/dnares/5.5.297; PubMed=9872454 [NCBI, ExPASy, EBI, Israel, Japan]
Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N., Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence features of the regions of 1,013,767 bp covered by sixteen physically assigned P1 and TAC clones.";
DNA Res. 5:297-308(1998).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
[3]
GENE FAMILY, AND NOMENCLATURE.
DOI=10.1104/pp.013086; PubMed=12529520 [NCBI, ExPASy, EBI, Israel, Japan]
Dinant S., Clark A.M., Zhu Y., Vilaine F., Palauqui J.-C., Kusiak C., Thompson G.A.;
"Diversity of the superfamily of phloem lectins (phloem protein 2) in angiosperms.";
Plant Physiol. 131:114-128(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB015478; BAB11060.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB025603; BAB11060.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY072088; AAL59911.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY096374; AAM20015.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_200025.1; -.
UniGene At.29636
3D structure databases
ModBase Q9FJ80.
Protein-protein interaction databases
IntAct Q9FJ80; -.
Organism-specific databases
TAIR At5g52120; -.
Gene expression databases
ArrayExpress Q9FJ80; -.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR001810; F-box.
Graphical view of domain structure.
Pfam PF00646; F-box; 1.
Pfam graphical view of domain structure.
PROSITE PS50181; FBOX; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9FJ80.
Genome annotation databases
GeneID 835288; -.
GenomeReviews BA000015_GR; AT5G52120.
KEGG ath:AT5G52120; -.
NMPDR fig|3702.1.peg.27091; -.
Other
ProtoNet Q9FJ80.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Ubl conjugation pathway.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom  To Length Description FTId
CHAIN   1   291  291     F-box protein PP2-A14. PRO_0000272209
DOMAIN   18    64  47     F-box. 
Sequence information
Length: 291 AA [This is the length of the unprocessed precursor] Molecular weight: 33631 Da [This is the MW of the unprocessed precursor] CRC64: BEB684A7A28A6CF3 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGAASSSIVR SEPFAGKLCG LEDVPENCIT AMFMYMEPPE ICLLARVNKS FHRASRSDAV 

        70         80         90        100        110        120 
WEDKLPSNYK FLVRRILEDQ QQVGVKDKLI YRKKEIYARL CRPNLFDTGT KEAWLDKRSG 

       130        140        150        160        170        180 
KVFLAISPKA MKITGIDDRR YWEHISSDES RFGSITYLRQ IWWLEAVGKI RFEFAPGKYS 

       190        200        210        220        230        240 
LLFKIQLGKP IRKCGRKTCS LDQVHGWDIK PVRFQLSTSD GQCAMSERHL DESGRWVYHH 

       250        260        270        280        290 
AGDFVVENQN SPVWVKFSML QIDCTHTKGG LCLDCVIICP FEYRGKYKYS D 

Q9FJ80 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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NPSA logo NPSA Sequence analysis tools

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