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UniProtKB/TrEMBL entry Q7PD39


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name Q7PD39_ANOGA
Primary accession number Q7PD39
Secondary accession numbers None
Integrated into TrEMBL on December 15, 2003
Sequence was last modified on October 23, 2007 (Sequence version 3)
Annotations were last modified on    July 22, 2008 (Entry version 47)
Name and origin of the protein
Protein name AGAP012559-PA (AGAP012572-PA) (AGAP012573-PA)
Synonyms None
Gene name
ORFNames: AgaP_AGAP012559, AgaP_AGAP012572, AgaP_AGAP012573
From
Anopheles gambiae str. PEST [TaxID: 180454] 
Taxonomy Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles.
Protein existence 4: Predicted;
References
[1]
NUCLEOTIDE SEQUENCE.
STRAIN=PEST;
DOI=10.1126/science.1076181; PubMed=12364791 [NCBI, ExPASy, EBI, Israel, Japan]
Holt R.A., Subramanian G.M., Halpern A., Sutton G.G., Charlab R., Nusskern D.R., Wincker P., Clark A.G., Ribeiro J.M.C., Wides R., Salzberg S.L., Loftus B.J., Yandell M.D., Majoros W.H., Rusch D.B., Lai Z., Kraft C.L., Abril J.F., Anthouard V., Arensburger P., Atkinson P.W., Baden H., de Berardinis V., Baldwin D., Benes V., Biedler J., Blass C., Bolanos R., Boscus D., Barnstead M., Cai S., Center A., Chaturverdi K., Christophides G.K., Chrystal M.A.M., Clamp M., Cravchik A., Curwen V., Dana A., Delcher A., Dew I., Evans C.A., Flanigan M., Grundschober-Freimoser A., Friedli L., Gu Z., Guan P., Guigo R., Hillenmeyer M.E., Hladun S.L., Hogan J.R., Hong Y.S., Hoover J., Jaillon O., Ke Z., Kodira C.D., Kokoza E., Koutsos A., Letunic I., Levitsky A.A., Liang Y., Lin J.-J., Lobo N.F., Lopez J.R., Malek J.A., McIntosh T.C., Meister S., Miller J.R., Mobarry C., Mongin E., Murphy S.D., O'Brochta D.A., Pfannkoch C., Qi R., Regier M.A., Remington K., Shao H., Sharakhova M.V., Sitter C.D., Shetty J., Smith T.J., Strong R., Sun J., Thomasova D., Ton L.Q., Topalis P., Tu Z.J., Unger M.F., Walenz B., Wang A.H., Wang J., Wang M., Wang X., Woodford K.J., Wortman J.R., Wu M., Yao A., Zdobnov E.M., Zhang H., Zhao Q., Zhao S., Zhu S.C., Zhimulev I., Coluzzi M., della Torre A., Roth C.W., Louis C., Kalush F., Mural R.J., Myers E.W., Adams M.D., Smith H.O., Broder S., Gardner M.J., Fraser C.M., Birney E., Bork P., Brey P.T., Venter J.C., Weissenbach J., Kafatos F.C., Collins F.H., Hoffman S.L.;
"The genome sequence of the malaria mosquito Anopheles gambiae.";
Science 298:129-149(2002).
[2]
NUCLEOTIDE SEQUENCE.
STRAIN=PEST;
DOI=10.1016/j.pt.2003.11.003; PubMed=14747013 [NCBI, ExPASy, EBI, Israel, Japan]
Mongin E., Louis C., Holt R.A., Birney E., Collins F.H.;
"The Anopheles gambiae genome: an update.";
Trends Parasitol. 20:49-52(2004).
[3]
NUCLEOTIDE SEQUENCE.
STRAIN=PEST;
DOI=10.1186/gb-2007-8-1-r5; PubMed=17210077 [NCBI, ExPASy, EBI, Israel, Japan]
Sharakhova M.V., Hammond M.P., Lobo N.F., Krzywinski J., Unger M.F., Hillenmeyer M.E., Bruggner R.V., Birney E., Collins F.H.;
"Update of the Anopheles gambiae PEST genome assembly.";
(er) Genome Biol. 8 (1), R5 (2007).
[4]
NUCLEOTIDE SEQUENCE.
STRAIN=PEST;
VectorBase;
Hammond M.;
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
Comments
  • CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AAAB01007568; EAA03005.3; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AAAB01008468; EAA03406.3; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AAAB01008468; EAL42097.3; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq XP_305996.3; -.
XP_307601.3; -.
XP_307606.3; -.
XP_315130.3; -.
XP_318362.3; -.
XP_560604.5; -.
3D structure databases
SMR Q7PD39; 2-117.
ModBase Q7PD39.
Ontologies
GO
GO:0000786; Cellular component: nucleosome (inferred from electronic annotation from InterPro).
GO:0005634; Cellular component: nucleus (inferred from electronic annotation from InterPro).
GO:0003677; Molecular function: DNA binding (inferred from electronic annotation from InterPro).
GO:0006334; Biological process: nucleosome assembly (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR009072; Histone-fold.
IPR000164; Histone_H3.
Graphical view of domain structure.
Gene3D G3DSA:1.10.20.10; Histone-fold; 1.
PRINTS PR00622; HISTONEH3.
PROSITE PS00322; HISTONE_H3_1; UNKNOWN_1.
PS00959; HISTONE_H3_2; 1.
Genome annotation databases
GeneID 1267439; -.
1269020; -.
1269025; -.
1275848; -.
1278746; -.
3292284; -.
KEGG aga:AgaP_27842; -.
aga:AgaP_27935; -.
aga:AgaP_27936; -.
VectorBase AGAP003910; Anopheles gambiae.
AGAP005024; Anopheles gambiae.
AGAP005025; Anopheles gambiae.
AGAP012559; Anopheles gambiae.
AGAP012572; Anopheles gambiae.
AGAP012573; Anopheles gambiae.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
None
Features
None
Sequence information
Length: 136 AA Molecular weight: 15388 Da CRC64: 6FD8508EA50A0EEC [This is a checksum on the sequence]
        10         20         30         40         50         60 
MARTKQTARK STGGKAPRKQ LATKAARKSA PATGGVKKPH RYRPGTVALR EIRRYQKSTE 

        70         80         90        100        110        120 
LLIRKLPFQR LVREIAQDFK TDLRFQSSAV MALQEASEAY LVGLFEDTNL CAIHAKRVTI 

       130 
MPKDIQLARR IRGERA 

Q7PD39 in FASTA format

View entry in original UniProtKB/TrEMBL format
View entry in raw text format (no links)
Request for annotation of this UniProtKB/TrEMBL entry

BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

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