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UniProtKB/Swiss-Prot entry P24672


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name RBL_ALVHS
Primary accession number P24672
Secondary accession numbers None
Integrated into Swiss-Prot on March 1, 1992
Sequence was last modified on March 1, 1992 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 53)
Name and origin of the protein
Protein name Ribulose bisphosphate carboxylase large chain
Synonyms RuBisCO large subunit
EC 4.1.1.39
Gene name
Name: cbbL
Synonyms: rbcL
From
Alvinoconcha hessleri symbiotic bacterium [TaxID: 2326] 
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=2247456 [NCBI, ExPASy, EBI, Israel, Japan]
Stein J.L., Haygood M., Felbeck H.;
"Nucleotide sequence and expression of a deep-sea ribulose-1,5-bisphosphate carboxylase gene cloned from a chemoautotrophic bacterial endosymbiont.";
Proc. Natl. Acad. Sci. U.S.A. 87:8850-8854(1990).
Comments
  • FUNCTION: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
  • CATALYTIC ACTIVITY: 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.
  • CATALYTIC ACTIVITY: 3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.
  • COFACTOR: Binds 1 magnesium ion per subunit (By similarity).
  • SUBUNIT: Heterohexadecamer of 8 large chains and 8 small chains (By similarity).
  • MISCELLANEOUS: The basic functional RuBisCO is composed of a large chain homodimer in a "head-to-tail" conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric "cap" on each end of the "barrel" (By similarity).
  • SIMILARITY: Belongs to the RuBisCO large chain family. Type I subfamily.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M34536; AAA27387.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A38262; A38262.
3D structure databases
HSSP O93627; 1GEH. [HSSP ENTRY / PDB]
SMR P24672; 5-466.
ModBase P24672.
Ontologies
GO
GO:0009573; Cellular component: chloroplast ribulose bisphosphate carboxylase complex (inferred from electronic annotation from InterPro).
GO:0000287; Molecular function: magnesium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0004497; Molecular function: monooxygenase activity (inferred from electronic annotation from UniProtKB-KW).
GO:0016984; Molecular function: ribulose-bisphosphate carboxylase activity (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0019253; Biological process: reductive pentose-phosphate cycle (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01338; -; 1.
PBIL [Tree]
InterPro IPR000685; RuBisCO_lsu_C.
IPR017443; RuBisCO_lsu_fd_N.
IPR017444; RuBisCO_lsu_N.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.110; RuBisCO_large; 1.
G3DSA:3.30.70.150; RuBisCO_large; 1.
Pfam PF00016; RuBisCO_large; 1.
PF02788; RuBisCO_large_N; 1.
Pfam graphical view of domain structure.
PROSITE PS00157; RUBISCO_LARGE; 1.
ProtoNet P24672.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calvin cycle; Carbon dioxide fixation; Lyase; Magnesium; Metal-binding; Monooxygenase; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   471  471     Ribulose bisphosphate carboxylase large chain. PRO_0000062618
ACT_SITE   167   167        Proton acceptor (By similarity). 
ACT_SITE   286   286        Proton acceptor (By similarity). 
METAL   193   193        Magnesium; via carbamate group (By similarity). 
METAL   195   195        Magnesium (By similarity). 
METAL   196   196        Magnesium (By similarity). 
BINDING   115   115        Substrate; in homodimeric partner (By similarity). 
BINDING   165   165        Substrate (By similarity). 
BINDING   169   169        Substrate (By similarity). 
BINDING   287   287        Substrate (By similarity). 
BINDING   319   319        Substrate (By similarity). 
BINDING   371   371        Substrate (By similarity). 
SITE   326   326  1     Transition state stabilizer (By similarity). 
MOD_RES   193   193        N6-carboxylysine (By similarity). 
Sequence information
Length: 471 AA [This is the length of the unprocessed precursor] Molecular weight: 52770 Da [This is the MW of the unprocessed precursor] CRC64: 990F5E9B5E55C504 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAKKYDAGVK DYRETYWMPD YTPKETDLLA CFKIIPQPGV PREEARAAVA AESSTGTWTT 

        70         80         90        100        110        120 
VWTDLLTDLD HYKGRAYAIE DVPGDEEAFY AFIAYPIDLF EEGSVVNVFT SLVGNVFGFK 

       130        140        150        160        170        180 
AIRALRLEDV RFPIAYVMTC NGPPHGIQVE RDIMNKYGRP LLGCTIKPKL GLSAKNYGRA 

       190        200        210        220        230        240 
VYECLRGGLD FTKDDENVNS QPFMRWRHGF DFVMEAIEKA ERETGERKGH YLNVTAPTPD 

       250        260        270        280        290        300 
EMFKRAEYAK EIGAPIIMHD YITGGFTANT GLAQWCRDNG VLLHIHRAMH AVLDRNPHHG 

       310        320        330        340        350        360 
IHFRVLTKIL RLSGGDHLHT GTVVGKLEGD REATLGWIDL LRESYIKEDR SRGIFFDQDW 

       370        380        390        400        410        420 
GSMPGVFAAC SGGIHVWHMP ALVTIFGEHA VLQFGGGTLG HPWGNAGAAA NRVALEACVE 

       430        440        450        460        470 
ARNEGHELEK EGKDILIQAA KHSPELKTAM ETWKEIKFEF DTVDKLDVAH K 

P24672 in FASTA format

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