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UniProtKB/Swiss-Prot entry P10902


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NADB_ECOLI
Primary accession number P10902
Secondary accession numbers P78099 Q2MAF6
Integrated into Swiss-Prot on July 1, 1989
Sequence was last modified on August 29, 2003 (Sequence version 4)
Annotations were last modified on    December 16, 2008 (Entry version 97)
Name and origin of the protein
Protein name L-aspartate oxidase
Synonyms LASPO
EC 1.4.3.16
Quinolinate synthetase B
Gene name
Name: nadB
Synonyms: nicB
OrderedLocusNames: b2574, JW2558
From
Escherichia coli (strain K12) [TaxID: 83333] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 1-19.
PubMed=2841129 [NCBI, ExPASy, EBI, Israel, Japan]
Flachmann R., Kunz N., Seifert J., Guetlich M., Wientjes F.-J., Laeufer A., Gassen H.G.;
"Molecular biology of pyridine nucleotide biosynthesis in Escherichia coli. Cloning and characterization of quinolinate synthesis genes nadA and nadB.";
Eur. J. Biochem. 175:221-228(1988).
[2]
SEQUENCE REVISION.
Kunz N.;
Submitted (APR-1989) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=K12;
Nashimoto H.;
"Non-ribosomal proteins affecting the assembly of ribosomes in Escherichia coli.";
(In) Nierhaus K.H. (eds.); The translational apparatus, pp.185-195, Plenum Press, New York (1993).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=K12;
Nashimoto H., Saito N.;
Submitted (SEP-1995) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1126/science.277.5331.1453; PubMed=9278503 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1474(1997).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1038/msb4100049; PubMed=16738553 [NCBI, ExPASy, EBI, Israel, Japan]
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
[7]
CHARACTERIZATION, AND PARTIAL PROTEIN SEQUENCE.
PubMed=2187483 [NCBI, ExPASy, EBI, Israel, Japan]
Seifert J., Kunz N., Flachmann R., Laeufer A., Jany K.-D., Gassen H.G.;
"Expression of the E. coli nadB gene and characterization of the gene product L-aspartate oxidase.";
Biol. Chem. Hoppe-Seyler 371:239-248(1990).
[8]
X-RAY CRYSTALLOGRAPHY (2.2 ANGSTROMS).
DOI=10.1016/S0969-2126(99)80099-9; PubMed=10425677 [NCBI, ExPASy, EBI, Israel, Japan]
Mattevi A., Tedeschi G., Bacchella L., Coda A., Negri A., Ronchi S.;
"Structure of L-aspartate oxidase: implications for the succinate dehydrogenase/fumarate reductase oxidoreductase family.";
Structure 7:745-756(1999).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X12714; CAA31217.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D13169; BAA02446.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D64044; BAA10921.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U00096; AAC75627.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP009048; BAE76750.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR E65035; OXECLD.
RefSeq AP_003160.1; -.
NP_417069.1; -.
3D structure databases
PDB
1CHU; X-ray; 2.20 A; A=1-540.[ExPASy / RCSB / EBI]
1KNP; X-ray; 2.60 A; A=1-540.[ExPASy / RCSB / EBI]
1KNR; X-ray; 2.50 A; A=1-540.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1CHU; -.
1KNP; -.
1KNR; -.
ModBase P10902.
Protein-protein interaction databases
DIP DIP:556N; -.
Enzyme and pathway databases
BioCyc EcoCyc:L-ASPARTATE-OXID-MON; -.
MetaCyc:L-ASPARTATE-OXID-MON; -.
Organism-specific databases
EchoBASE EB0625; -.
EcoGene EG10631; nadB.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from InterPro).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0008734; Molecular function: L-aspartate oxidase activity (inferred from electronic annotation from InterPro).
GO:0009435; Biological process: NAD biosynthetic process (inferred from electronic annotation from InterPro).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR003953; FAD_bind2_N.
IPR013027; FAD_pyr_nucl-diS_OxRdtase.
IPR004112; Fum_Rdtase/Succ_DHase_flav_C.
IPR005288; NadB.
IPR001100; Pyr_nuc-diS_OxRdtase.
Graphical view of domain structure.
Pfam PF00890; FAD_binding_2; 1.
PF02910; Succ_DH_flav_C; 1.
Pfam graphical view of domain structure.
PRINTS PR00368; FADPNR.
PR00411; PNDRDTASEI.
TIGRFAMs TIGR00551; nadB; 1.
Genome annotation databases
GeneID 947049; -.
GenomeReviews AP009048_GR; JW2558.
U00096_GR; b2574.
KEGG ecj:JW2558; -.
eco:b2574; -.
Phylogenomic databases
HOGENOM P10902; -.
Genome annotation databases
CMR P10902; b2574.
Other
ProtoNet P10902.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing; FAD; Flavoprotein; Oxidoreductase; Pyridine nucleotide biosynthesis.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   540  540     L-aspartate oxidase. PRO_0000184384
NP_BIND   12    26  15     FAD (Potential). 
ACT_SITE   244   244        By similarity. 
ACT_SITE   263   263        By similarity. 
CONFLICT   160   160        S -> T (in Ref. 1, 3 and 4). 
CONFLICT   485   485        N -> D (in Ref. 1; CAA31217). 
STRAND   6     8  3      
STRAND   10    14  5      
HELIX   18    27  10      
TURN   28    30  3      
STRAND   33    36  4      
HELIX   60    73  14      
TURN   74    76  3      
HELIX   80    99  20      
HELIX   145   150  6      
STRAND   154   157  4      
STRAND   159   167  9      
HELIX   168   170  3      
STRAND   178   186  9      
TURN   187   190  4      
STRAND   191   196  6      
STRAND   198   202  5      
HELIX   208   210  3      
STRAND   211   215  5      
HELIX   217   219  3      
HELIX   223   230  8      
STRAND   241   248  8      
HELIX   260   264  5      
STRAND   268   270  3      
HELIX   278   280  3      
HELIX   285   287  3      
HELIX   290   304  15      
STRAND   309   312  4      
HELIX   319   324  6      
HELIX   326   333  8      
TURN   334   336  3      
TURN   339   341  3      
STRAND   344   354  11      
STRAND   356   358  3      
STRAND   366   368  3      
STRAND   370   372  3      
HELIX   374   376  3      
STRAND   380   382  3      
HELIX   390   409  20      
HELIX   430   450  21      
STRAND   451   455  5      
HELIX   457   478  22      
HELIX   485   506  22      
Sequence information
Length: 540 AA [This is the length of the unprocessed precursor] Molecular weight: 60337 Da [This is the MW of the unprocessed precursor] CRC64: 7B6CFF633BD4AFEC [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNTLPEHSCD VLIIGSGAAG LSLALRLADQ HQVIVLSKGP VTEGSTFYAQ GGIAAVFDET 

        70         80         90        100        110        120 
DSIDSHVEDT LIAGAGICDR HAVEFVASNA RSCVQWLIDQ GVLFDTHIQP NGEESYHLTR 

       130        140        150        160        170        180 
EGGHSHRRIL HAADATGREV ETTLVSKALN HPNIRVLERS NAVDLIVSDK IGLPGTRRVV 

       190        200        210        220        230        240 
GAWVWNRNKE TVETCHAKAV VLATGGASKV YQYTTNPDIS SGDGIAMAWR AGCRVANLEF 

       250        260        270        280        290        300 
NQFHPTALYH PQARNFLLTE ALRGEGAYLK RPDGTRFMPD FDERGELAPR DIVARAIDHE 

       310        320        330        340        350        360 
MKRLGADCMF LDISHKPADF IRQHFPMIYE KLLGLGIDLT QEPVPIVPAA HYTCGGVMVD 

       370        380        390        400        410        420 
DHGRTDVEGL YAIGEVSYTG LHGANRMASN SLLECLVYGW SAAEDITRRM PYAHDISTLP 

       430        440        450        460        470        480 
PWDESRVENP DERVVIQHNW HELRLFMWDY VGIVRTTKRL ERALRRITML QQEIDEYYAH 

       490        500        510        520        530        540 
FRVSNNLLEL RNLVQVAELI VRCAMMRKES RGLHFTLDYP ELLTHSGPSI LSPGNHYINR 

P10902 in FASTA format

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View entry in raw text format (no links)
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