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UniProtKB/Swiss-Prot entry P0C568

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name L_MOKV
Primary accession number P0C568
Secondary accession numbers None
Integrated into Swiss-Prot on July 10, 2007
Sequence was last modified on July 10, 2007 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 10)
Name and origin of the protein
Protein name Large structural protein
Synonyms Protein L
Transcriptase
Replicase
Includes RNA-directed RNA polymerase
     (EC 2.7.7.48)
mRNA (guanine-N(7)-)-methyltransferase
     (EC 2.1.1.56)
mRNA guanylyltransferase
     (EC 2.7.7.-)
Gene name
Name: L
From
Mokola virus (MOKV) [TaxID: 12538] 
Taxonomy Viruses; ssRNA negative-strand viruses; Mononegavirales; Rhabdoviridae; Lyssavirus.
Virus hosts Canis familiaris (Dog) [TaxID: 9615]
Chodsigoa caovansunga (Shrew) [TaxID: 269271]
Felis silvestris catus (Cat) [TaxID: 9685]
Rodentia [TaxID: 9989]
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [GENOMIC RNA].
PubMed=9225031 [NCBI, ExPASy, EBI, Israel, Japan]
Le Mercier P., Jacob Y., Tordo N.;
"The complete Mokola virus genome sequence: structure of the RNA-dependent RNA polymerase.";
J. Gen. Virol. 78:1571-1576(1997).
Comments
  • FUNCTION: Displays RNA-directed RNA polymerase, mRNA guanylyl transferase, mRNA (guanine-7-N-)-methyltransferase and poly(A) synthetase activities. The viral mRNA guanylyl transferase displays a different biochemical reaction than the cellular enzyme. The template is composed of the viral RNA tightly encapsidated by the nucleoprotein (N). Functions either as transcriptase or as replicase. The transcriptase synthesizes subsequently five subgenomic RNAs, assuring their capping and polyadenylation by a stuttering mechanism. The replicase mode is dependent on intracellular N protein concentration. In this mode, the polymerase replicates the whole viral genome without recognizing the transcriptional signals (By similarity).
  • CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).
  • CATALYTIC ACTIVITY: S-adenosyl-L-methionine + G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppR-RNA.
  • SUBUNIT: Interacts with the P protein to form the functional polymerase (By similarity).
  • SUBCELLULAR LOCATION: Virion. Cytoplasm (By similarity).
  • SIMILARITY: Belongs to the rhabdoviruses protein L family.
  • SIMILARITY: Contains 1 RdRp catalytic domain.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Y09762; -; NOT_ANNOTATED_CDS; Genomic_RNA.[EMBL / GenBank / DDBJ]
RefSeq YP_142354.1; -.
3D structure databases
ModBase P0C568.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from UniProtKB-KW).
GO:0019012; Cellular component: virion (inferred from electronic annotation from UniProtKB-KW).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from UniProtKB-KW).
GO:0004482; Molecular function: mRNA (guanine-N7-)-methyltransferase activity (inferred from electronic annotation from EC).
GO:0003723; Molecular function: RNA binding (inferred from electronic annotation from InterPro).
GO:0003968; Molecular function: RNA-directed RNA polymerase activity (inferred from electronic annotation from InterPro).
GO:0006370; Biological process: mRNA capping (inferred from electronic annotation from UniProtKB-KW).
GO:0006410; Biological process: transcription, RNA-dependent (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR017234; RNA-dir_RNA_pol_rhabdovir.
IPR014023; RNA_pol_cat.
IPR001016; RNA_pol_L_viral.
Graphical view of domain structure.
Pfam PF00946; Paramyx_RNA_pol; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF037546; RNA_pol_RhabdoV_sub; 1.
PROSITE PS50526; RDRP_SSRNA_NEG_NONSEG; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
GeneID 3159474; -.
Other
ProtoNet P0C568.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Complete proteome; Cytoplasm; Methyltransferase; mRNA capping; mRNA processing; Multifunctional enzyme; Nucleotide-binding; Nucleotidyltransferase; RNA replication; RNA-directed RNA polymerase; S-adenosyl-L-methionine; Transferase; Virion.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom    To Length Description FTId
CHAIN   1   2127  2127     Large structural protein. PRO_0000294416
DOMAIN   611    799  189     RdRp catalytic. 
REGION   1562   2127  566     Interaction with P protein (By similarity). 
Sequence information
Length: 2127 AA [This is the length of the unprocessed precursor] Molecular weight: 242160 Da [This is the MW of the unprocessed precursor] CRC64: ACE7284E16A95328 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MMDVTEVYDD PIDPVEPEGE WNSSPVVPNI LRNSDYNLNS PLLEDPANLM IQWLTSGNRP 

        70         80         90        100        110        120 
SRMNVTENTT RSYKVLRALF KGVDIATIKI GGVGAQAMMG LWVLGSHSES SRSRKCLADL 

       130        140        150        160        170        180 
SAFYQRTLPI ESILNHTLMN RGLQTPREGV LSGLNRVSYD QSFGRYLGNL YSSYLLFHVI 

       190        200        210        220        230        240 
ILYMNALDWE EEKTILALWR DITSIDIKND RVYFKDPLWG KLLVTKDFVY AHNSNCLFDK 

       250        260        270        280        290        300 
NYTLMLKDLF LSRFNSLLIL VSPPDSRYSD DLAANLCRLY ISGDRLLSSC GNAGYDVIKM 

       310        320        330        340        350        360 
LEPCVVDLLV QRAETFRPLI HSLGEFPAFI KDKTTQLIGT FGPCASQFFS MLQQFDNIHD 

       370        380        390        400        410        420 
LVFIYGCYRH WGHPYIDYRK GLSKLFDQVH MKKTIDQQYQ ERLASDLARK ILRWGFEKYS 

       430        440        450        460        470        480 
KWYLDTGVIP KDHPLAPYIA TQTWPPKHVV DLLGDSWHTL PMTQIFEVPE SMDPSEILDD 

       490        500        510        520        530        540 
KSHSFTRTKL SSWSSEHRGG PVPSEKVIIT ALSRPPVNPR DFLKSIDQGG LPDDDLIIGL 

       550        560        570        580        590        600 
KPKERELKID GRFFALMSWN LRLYFVITEK LLANHIIPLF DALTMTDNLN KVFKKLIDRV 

       610        620        630        640        650        660 
TGQGLKDYSR VTYAFHLDYE KWNNHQRLES TKDVFSVLDR AFGMKKVFSR THEFFQKSWI 

       670        680        690        700        710        720 
YYSDRSDLIG IWKDQIYCLD MTEGPTCWNG QDGGLEGLRQ KGWSLVSLLM IERESKTRNT 

       730        740        750        760        770        780 
RTKILAQGDN QVLCPTYMLS SGLNNEGLRY ELENISKNAM SIYRAIEDGA SKLGLIIKKE 

       790        800        810        820        830        840 
ETMCSFDFLI YGKTPLFRGN ILVPESKRWA RVSCISNDQI VNLANIMSTV STNALTVAQH 

       850        860        870        880        890        900 
SQSLVKPMRD FLLMSVQAIY HYLLFSPIIK DRVYKVLNSK DDDFLLAMSR IIYLDPSLGG 

       910        920        930        940        950        960 
VSGMSLGRFP IRQFSDPVSE GLTFWKEIWL SSSETWIHHL CQEAGNPDLG DRSLESFTRL 

       970        980        990       1000       1010       1020 
LEDPTTLNIR GGASPTILLK EAIRKALYDE VDRVENSEFR EAIILSKTHR DNFILFLKSI 

      1030       1040       1050       1060       1070       1080 
EPLFPRFLSE LFSSSFLGIP ESIIGLIQNS RTVRRQFRKS LSKTLEESFL NSEIHGINRV 

      1090       1100       1110       1120       1130       1140 
TQTPQRLGRV WTCSAERADQ LREISWGRKV VGTTVPNPSE MLTLVPKSSV ACGCYTREVG 

      1150       1160       1170       1180       1190       1200 
NPRISVSVLP SFDPSFLSRG PLKGYLGSST SMSTQLFHSW EKVTNVHVVK RALSLKESIN 

      1210       1220       1230       1240       1250       1260 
WFVSRESNLA KTLIGNILSL TGPSFPIEEA PVFKRTGSAL HRFKSARYSE GGYSAVCPNL 

      1270       1280       1290       1300       1310       1320 
LSHISVSTDT MSDLTQDGTN FDFMFQPLML YAQTWTSELV QKDFRLADST FHWHLRCQKC 

      1330       1340       1350       1360       1370       1380 
IRPIEEVTLD APQLFDFPDI SSRISRMVSG AVPQFRKLPE VGLKAGDLTA LSSSERSYHI 

      1390       1400       1410       1420       1430       1440 
GTAQGLLYSI LVAVHDPGYN DNSLFPVNIY GKVSARGYLR GLARGILIGS SICFLTRMTN 

      1450       1460       1470       1480       1490       1500 
ININRPLELI SGVISYILLK LDNHPSLYIM LKEPELRAEI FSIPQKVPAA YPTTMEEGNR 

      1510       1520       1530       1540       1550       1560 
SVLCYLQQVL RYERDSMSFP PGNDILWIFS DFRSIKMTYL TLITFQAYLW LQRVERNLSK 

      1570       1580       1590       1600       1610       1620 
QVRVRLRQLN SLMRQVLGGH GEDTIDSDDE ILSLLKESLR RTRWVDQEVR HAAKSMTPDL 

      1630       1640       1650       1660       1670       1680 
NPVPKISRRM GSSEWICSAQ QIAISTSLNP ASASDIDLRS LSRQYQNPLI SGLRVVQWAT 

      1690       1700       1710       1720       1730       1740 
GAHYKIKPIL NDLDVCPCLS LVIGDGSGGI SRVVLSMFPD SKLVFNSLLE VNDLMASGTH 

      1750       1760       1770       1780       1790       1800 
PLPPSALMRG GDDITSRVID FESIWEKPSD LRNPLTWKYF HSIQSKLRSQ FDLIVCDAEV 

      1810       1820       1830       1840       1850       1860 
TDIESVNKIT LLLSDFSMSI KGPLYLIFKT YGTMLVNPDY KAIHHLSRAF PNVTGFVTQM 

      1870       1880       1890       1900       1910       1920 
TSSFSSEIYL RFSKTGYFFR DHELLTASTV REMSLVLFNC SNPKSEMLRA RTLNYQDLIR 

      1930       1940       1950       1960       1970       1980 
GFPPEIISNP YNEMIITLID SEVESFLVHK VVDDLELKRG APSKMAIIIA VAILFSNSVL 

      1990       2000       2010       2020       2030       2040 
NVSKSLNEPK FFPPSDPKLL RHFNICSSTL LFLSTALGDL SNFTRLHELY NSPVTYYFGK 

      2050       2060       2070       2080       2090       2100 
QTIKGRRYLS WSWANSSPIF KKVACNSSIS LSSHWIRLIY KIVKTTRLNC SPRDMLRETE 

      2110       2120 
ACLRTYNKWI NIRDTRSRTS ILDYCCL
P0C568 in FASTA format

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