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UniProtKB/Swiss-Prot entry P09060


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ODBA_PSEPU
Primary accession number P09060
Secondary accession numbers None
Integrated into Swiss-Prot on November 1, 1988
Sequence was last modified on February 1, 1996 (Sequence version 2)
Annotations were last modified on    December 16, 2008 (Entry version 65)
Name and origin of the protein
Protein name 2-oxoisovalerate dehydrogenase subunit alpha
Synonyms EC 1.2.4.4
Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain
BCKDH E1-alpha
Gene name
Name: bkdA1
From
Pseudomonas putida [TaxID: 303] 
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=G2;
PubMed=3416875 [NCBI, ExPASy, EBI, Israel, Japan]
Burns G., Brown T., Hatter K., Idriss J., Sokatch J.R.;
"Similarity of the E1 subunits of branched-chain-oxoacid dehydrogenase from Pseudomonas putida to the corresponding subunits of mammalian branched-chain-oxoacid and pyruvate dehydrogenases.";
Eur. J. Biochem. 176:311-317(1988).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-17.
STRAIN=G2;
PubMed=2211503 [NCBI, ExPASy, EBI, Israel, Japan]
Madhusudhan K.T., Huang G., Burns G., Sokatch J.R.;
"Transcriptional analysis of the promoter region of the Pseudomonas putida branched-chain keto acid dehydrogenase operon.";
J. Bacteriol. 172:5655-5663(1990).
[3]
PROTEIN SEQUENCE OF 1-13.
PubMed=8521848 [NCBI, ExPASy, EBI, Israel, Japan]
Hester K., Luo J., Burns G., Braswell E.H., Sokatch J.R.;
"Purification of active E1 alpha 2 beta 2 of Pseudomonas putida branched-chain-oxoacid dehydrogenase.";
Eur. J. Biochem. 233:828-836(1995).
[4]
X-RAY CRYSTALLOGRAPHY (2.4 ANGSTROMS).
DOI=10.1038/11563; PubMed=10426958 [NCBI, ExPASy, EBI, Israel, Japan]
Aevarsson A., Seger K., Turley S., Sokatch J.R., Hol W.G.J.;
"Crystal structure of 2-oxoisovalerate and dehydrogenase and the architecture of 2-oxo acid dehydrogenase multienzyme complexes.";
Nat. Struct. Biol. 6:785-792(1999).
Comments
  • FUNCTION: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  • CATALYTIC ACTIVITY: 3-methyl-2-oxobutanoate + [dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] lipoyllysine = [dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(2-methylpropanoyl)dihydrolipoyllysine + CO2.
  • COFACTOR: Thiamine pyrophosphate.
  • SUBUNIT: Heterodimer of an alpha and a beta chain.
  • INTERACTION:
    P09061:bkdA2; NbExp=1; IntAct=EBI-1027855, EBI-1027848;
  • SIMILARITY: Belongs to the BCKDHA family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M57613; AAA65614.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S01317; DEPSXA.
3D structure databases
PDB
1QS0; X-ray; 2.40 A; A=2-408.[ExPASy / RCSB / EBI]
2BP7; X-ray; 2.90 A; A/C/E/G=1-410.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1QS0; -.
2BP7; -.
ModBase P09060.
Protein-protein interaction databases
DIP DIP:6208N; -.
IntAct P09060; 1.
Ontologies
GO
GO:0003863; Molecular function: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity (inferred from electronic annotation from EC).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001017; DHase_E1.
Graphical view of domain structure.
Pfam PF00676; E1_dh; 1.
Pfam graphical view of domain structure.
Other
ProtoNet P09060.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Direct protein sequencing; Oxidoreductase; Thiamine pyrophosphate.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   410  410     2-oxoisovalerate dehydrogenase subunit alpha. PRO_0000162249
HELIX   24    26  3      
HELIX   44    47  4      
HELIX   48    51  4      
HELIX   67    69  3      
HELIX   74    99  26      
STRAND   102   104  3      
TURN   110   112  3      
HELIX   113   122  10      
STRAND   127   130  4      
HELIX   136   141  6      
HELIX   146   154  9      
TURN   160   163  4      
HELIX   173   175  3      
STRAND   182   185  4      
HELIX   186   200  15      
STRAND   207   212  6      
HELIX   214   217  4      
HELIX   219   231  13      
STRAND   235   241  7      
STRAND   243   245  3      
HELIX   250   253  4      
TURN   254   257  4      
HELIX   262   266  5      
STRAND   270   275  6      
HELIX   279   294  16      
STRAND   300   305  6      
HELIX   318   320  3      
HELIX   326   329  4      
HELIX   335   345  11      
HELIX   351   373  23      
STRAND   378   380  3      
HELIX   388   390  3      
STRAND   391   396  6      
HELIX   399   406  8      
Sequence information
Length: 410 AA [This is the length of the unprocessed precursor] Molecular weight: 45268 Da [This is the MW of the unprocessed precursor] CRC64: 0C998460CCFB9CF4 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNEYAPLRLH VPEPTGRPGC QTDFSYLRLN DAGQARKPPV DVDAADTADL SYSLVRVLDE 

        70         80         90        100        110        120 
QGDAQGPWAE DIDPQILRQG MRAMLKTRIF DSRMVVAQRQ KKMSFYMQSL GEEAIGSGQA 

       130        140        150        160        170        180 
LALNRTDMCF PTYRQQSILM ARDVSLVEMI CQLLSNERDP LKGRQLPIMY SVREAGFFTI 

       190        200        210        220        230        240 
SGNLATQFVQ AVGWAMASAI KGDTKIASAW IGDGATAESD FHTALTFAHV YRAPVILNVV 

       250        260        270        280        290        300 
NNQWAISTFQ AIAGGESTTF AGRGVGCGIA SLRVDGNDFV AVYAASRWAA ERARRGLGPS 

       310        320        330        340        350        360 
LIEWVTYRAG PHSTSDDPSK YRPADDWSHF PLGDPIARLK QHLIKIGHWS EEEHQATTAE 

       370        380        390        400        410 
FEAAVIAAQK EAEQYGTLAN GHIPSAASMF EDVYKEMPDH LRRQRQELGV 

P09060 in FASTA format

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