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UniProtKB/Swiss-Prot entry P08287


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name H11L_CHICK
Primary accession number P08287
Secondary accession numbers None
Integrated into Swiss-Prot on August 1, 1988
Sequence was last modified on January 23, 2007 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 63)
Name and origin of the protein
Protein name Histone H1.11L
Synonyms None
Gene name None
From
Gallus gallus (Chicken) [TaxID: 9031] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=3597432 [NCBI, ExPASy, EBI, Israel, Japan]
Coles L.S., Robins A.J., Madley L.K., Wells J.R.E.;
"Characterization of the chicken histone H1 gene complement. Generation of a complete set of vertebrate H1 protein sequences.";
J. Biol. Chem. 262:9656-9663(1987).
[2]
STRUCTURE BY NMR OF 41-114.
DOI=10.1021/bi00093a011; PubMed=8218199 [NCBI, ExPASy, EBI, Israel, Japan]
Cerf C., Lippens G., Muyldermans S., Segers A., Ramakrishnan V., Wodak S.J., Hallenga K., Wyns L.;
"Homo- and heteronuclear two-dimensional NMR studies of the globular domain of histone H1: sequential assignment and secondary structure.";
Biochemistry 32:11345-11351(1993).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M17019; AAA48789.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR B28456; B28456.
RefSeq NP_001035733.1; -.
UniGene Gga.41653
3D structure databases
PDB
1GHC; NMR; -; A=41-114.[ExPASy / RCSB / EBI]
PDBsum 1GHC; -.
SMR P08287; 41-114.
ModBase P08287.
Ontologies
GO
GO:0000786; Cellular component: nucleosome (inferred from electronic annotation from InterPro).
GO:0005634; Cellular component: nucleus (inferred from electronic annotation from InterPro).
GO:0003677; Molecular function: DNA binding (inferred from electronic annotation from InterPro).
GO:0006334; Biological process: nucleosome assembly (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR005818; Histone_H1/H5.
IPR005819; Histone_H5.
IPR011991; Wing_hlx_DNA_bd.
Graphical view of domain structure.
Gene3D G3DSA:1.10.10.10; Wing_hlx_DNA_bd; 1.
Pfam PF00538; Linker_histone; 1.
Pfam graphical view of domain structure.
PRINTS PR00624; HISTONEH5.
SMART SM00526; H15; 1.
SMART graphical view of domain structure.
Genome annotation databases
Ensembl ENSGALG00000011759; Gallus gallus. [Contig view]
GeneID 427892; -.
KEGG gga:427892; -.
Phylogenomic databases
HOGENOM P08287; -.
HOVERGEN P08287; -.
Other
LinkHub P08287; -.
ProtoNet P08287.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Acetylation; Chromosomal protein; DNA-binding; Nucleus.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom  To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   225  224     Histone H1.11L. PRO_0000195931
REGION   41   114  74     Globular. 
MOD_RES   2     2        N-acetylserine (By similarity). 
STRAND   41    43  3      
HELIX   44    54  11      
STRAND   56    59  4      
HELIX   66    68  3      
STRAND   69    74  6      
STRAND   77    80  4      
HELIX   81    87  7      
TURN   88    90  3      
HELIX   91    94  4      
Sequence information
Length: 225 AA [This is the length of the unprocessed precursor] Molecular weight: 22528 Da [This is the MW of the unprocessed precursor] CRC64: BFDA6897A7D5599F [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSETAPAPAA EAAPAAAPAP AKAAAKKPKK AAGGAKARKP AGPSVTELIT KAVSASKERK 

        70         80         90        100        110        120 
GLSLAALKKA LAAGGYDVEK NNSRIKLGLK SLVSKGTLVQ TKGTGASGSF RLSKKPGEVK 

       130        140        150        160        170        180 
EKAPKKKASA AKPKKPAAKK PAAAAKKPKK AVAVKKSPKK AKKPAASATK KSAKSPKKVT 

       190        200        210        220 
KAVKPKKAVA AKSPAKAKAV KPKAAKPKAA KPKAAKAKKA AAKKK 

P08287 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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