ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry P07896


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name ECHP_RAT
Primary accession number P07896
Secondary accession number Q5EBD2
Integrated into Swiss-Prot on August 1, 1988
Sequence was last modified on January 23, 2007 (Sequence version 2)
Annotations were last modified on    December 16, 2008 (Entry version 86)
Name and origin of the protein
Protein name Peroxisomal bifunctional enzyme
Synonyms PBE
PBFE
Includes Enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase
     (EC 4.2.1.17)
     (EC 5.3.3.8)
3-hydroxyacyl-CoA dehydrogenase
     (EC 1.1.1.35)
Gene name
Name: Ehhadh
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=4019459 [NCBI, ExPASy, EBI, Israel, Japan]
Osumi T., Ishii N., Hijikata M., Kamijo K., Ozasa H., Furuta S., Miyazawa S., Kondo K., Inoue K., Kagamiyama H., Hashimoto T.;
"Molecular cloning and nucleotide sequence of the cDNA for rat peroxisomal enoyl-CoA: hydratase-3-hydroxyacyl-CoA dehydrogenase bifunctional enzyme.";
J. Biol. Chem. 260:8905-8910(1985).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Liver;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-24.
PubMed=3036802 [NCBI, ExPASy, EBI, Israel, Japan]
Ishii N., Hijikata M., Osumi T., Hashimoto T.;
"Structural organization of the gene for rat enoyl-CoA hydratase:3-hydroxyacyl-CoA dehydrogenase bifunctional enzyme.";
J. Biol. Chem. 262:8144-8150(1987).
[4]
PROTEIN SEQUENCE OF 260-265; 294-302; 520-531 AND 710-719.
PubMed=8856068 [NCBI, ExPASy, EBI, Israel, Japan]
Dieuaide-Noubhani M., Novikov D., Baumgart E., Vanhooren J.C., Fransen M., Goethals M., Vandekerckhove J., Van Veldhoven P.P., Mannaerts G.P.;
"Further characterization of the peroxisomal 3-hydroxyacyl-CoA dehydrogenases from rat liver. Relationship between the different dehydrogenases and evidence that fatty acids and the C27 bile acids di- and tri-hydroxycoprostanic acids are metabolized by separate multifunctional proteins.";
Eur. J. Biochem. 240:660-666(1996).
[5]
FUNCTION AS AN ISOMERASE.
PubMed=2303409 [NCBI, ExPASy, EBI, Israel, Japan]
Palosaari P.M., Hiltunen J.K.;
"Peroxisomal bifunctional protein from rat liver is a trifunctional enzyme possessing 2-enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase, and delta 3, delta 2-enoyl-CoA isomerase activities.";
J. Biol. Chem. 265:2446-2449(1990).
[6]
X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS) OF 260-722, AND SUBUNIT.
DOI=10.1016/j.jmb.2005.10.085; PubMed=16330050 [NCBI, ExPASy, EBI, Israel, Japan]
Taskinen J.P., Kiema T.R., Hiltunen J.K., Wierenga R.K.;
"Structural studies of MFE-1: the 1.9 A crystal structure of the dehydrogenase part of rat peroxisomal MFE-1.";
J. Mol. Biol. 355:734-746(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
K03249; AAA41825.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC089777; AAH89777.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J02748; AAA41826.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A23575; DWRTEP.
RefSeq NP_598290.1; -.
UniGene Rn.3671
3D structure databases
PDB
1ZCJ; X-ray; 1.90 A; A=260-722.[ExPASy / RCSB / EBI]
PDBsum 1ZCJ; -.
ModBase P07896.
Organism-specific databases
RGD 621441; Ehhadh.
Gene expression databases
ArrayExpress P07896; -.
GermOnline ENSRNOG00000001770; Rattus norvegicus.
Ontologies
GO
GO:0005777; Cellular component: peroxisome (inferred from direct assay from HGNC).
GO:0003857; Molecular function: 3-hydroxyacyl-CoA dehydrogenase activity (inferred from electronic annotation from EC).
GO:0050662; Molecular function: coenzyme binding (inferred from electronic annotation from InterPro).
GO:0004165; Molecular function: dodecenoyl-CoA delta-isomerase activity (inferred from electronic annotation from EC).
GO:0004300; Molecular function: enoyl-CoA hydratase activity (inferred from electronic annotation from EC).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR006180; 3-OHacyl-CoA_DHase_CS.
IPR006176; 3-OHacyl-CoA_DHase_NAD-bd.
IPR006108; 3HC_DHase_C.
IPR001753; Crotonase_core.
IPR013328; DHase_multihelical.
IPR016040; NAD(P)-bd.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
G3DSA:1.10.1040.10; Opine_DH; 2.
Pfam PF00725; 3HCDH; 1.
PF02737; 3HCDH_N; 1.
PF00378; ECH; 1.
Pfam graphical view of domain structure.
PROSITE PS00067; 3HCDH; 1.
PS00166; ENOYL_COA_HYDRATASE; 1.
Proteomics databases
PRIDE P07896; -.
Genome annotation databases
Ensembl ENSRNOG00000001770; Rattus norvegicus. [Contig view]
GeneID 171142; -.
KEGG rno:171142; -.
NMPDR fig|10116.3.peg.7563; -.
Phylogenomic databases
HOVERGEN P07896; -.
Other
NextBio 621936; -.
ProtoNet P07896.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Acetylation; Direct protein sequencing; Fatty acid metabolism; Isomerase; Lipid metabolism; Lyase; Multifunctional enzyme; NAD; Oxidoreductase; Peroxisome.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   722  721     Peroxisomal bifunctional enzyme. PRO_0000109249
REGION   2   281  280     Enoyl-CoA hydratase / isomerase. 
REGION   282   571  290     3-hydroxyacyl-CoA dehydrogenase. 
MOTIF   720   722  3     Microbody targeting signal. 
BINDING   100   100        Substrate; via amide nitrogen (By similarity). 
SITE   123   123  1     Important for catalytic activity (By similarity). 
MOD_RES   2     2        Blocked amino end (Ala). 
MOD_RES   241   241        N6-acetyllysine (By similarity). 
MOD_RES   330   330        N6-acetyllysine (By similarity). 
HELIX   262   272  11      
HELIX   273   278  6      
TURN   288   290  3      
STRAND   298   302  5      
HELIX   306   316  11      
TURN   317   319  3      
STRAND   321   325  5      
HELIX   329   352  24      
STRAND   362   366  5      
HELIX   368   371  4      
STRAND   375   379  5      
HELIX   385   398  14      
STRAND   404   407  4      
STRAND   410   412  3      
HELIX   414   418  5      
HELIX   424   426  3      
STRAND   427   432  6      
TURN   436   438  3      
STRAND   441   446  6      
HELIX   452   464  13      
STRAND   468   472  5      
TURN   476   479  4      
HELIX   480   496  17      
HELIX   501   511  11      
HELIX   517   524  8      
HELIX   526   535  10      
STRAND   538   541  4      
HELIX   560   566  7      
TURN   572   575  4      
STRAND   576   583  8      
STRAND   589   591  3      
HELIX   593   605  13      
HELIX   615   635  21      
STRAND   638   640  3      
HELIX   642   652  11      
HELIX   657   659  3      
HELIX   662   669  8      
HELIX   671   684  14      
HELIX   689   691  3      
HELIX   695   702  8      
HELIX   708   710  3      
HELIX   711   715  5      
Sequence information
Length: 722 AA [This is the length of the unprocessed precursor] Molecular weight: 78658 Da [This is the MW of the unprocessed precursor] CRC64: 76ACC709C5F23E86 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAEYLRLPHS LAMIRLCNPP VNAVSPTVIR EVRNGLQKAG SDHTVKAIVI CGANGNFCAG 

        70         80         90        100        110        120 
ADIHGFSAFT PGLALGSLVD EIQRYQKPVL AAIQGVALGG GLELALGCHY RIANAKARVG 

       130        140        150        160        170        180 
LPEVTLGILP GARGTQLLPR VVGVPVALDL ITSGKYLSAD EALRLGILDA VVKSDPVEEA 

       190        200        210        220        230        240 
IKFAQKIIDK PIEPRRIFNK PVPSLPNMDS VFAEAIAKVR KQYPGVLAPE TCVRSIQASV 

       250        260        270        280        290        300 
KHPYEVGIKE EEKLFMYLRA SGQAKALQYA FFAEKSANKW STPSGASWKT ASAQPVSSVG 

       310        320        330        340        350        360 
VLGLGTMGRG IAISFARVGI SVVAVESDPK QLDAAKKIIT FTLEKEASRA HQNGQASAKP 

       370        380        390        400        410        420 
KLRFSSSTKE LSTVDLVVEA VFEDMNLKKK VFAELSALCK PGAFLCTNTS ALNVDDIASS 

       430        440        450        460        470        480 
TDRPQLVIGT HFFSPAHVMR LLEVIPSRYS SPTTIATVMS LSKKIGKIGV VVGNCYGFVG 

       490        500        510        520        530        540 
NRMLAPYYNQ GFFLLEEGSK PEDVDGVLEE FGFKMGPFRV SDLAGLDVGW KIRKGQGLTG 

       550        560        570        580        590        600 
PSLPPGTPVR KRGNSRYSPL GDMLCEAGRF GQKTGKGWYQ YDKPLGRIHK PDPWLSTFLS 

       610        620        630        640        650        660 
QYREVHHIEQ RTISKEEILE RCLYSLINEA FRILEEGMAA RPEHIDVIYL HGYGWPRHKG 

       670        680        690        700        710        720 
GPMFYAASVG LPTVLEKLQK YYRQNPDIPQ LEPSDYLRRL VAQGSPPLKE WQSLAGPHGS 


KL 

P07896 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by au flag APAF Australia Mirror sites: Brazil  Canada  China  Korea  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!