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UniProtKB/Swiss-Prot entry P00198


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name FER_CLOAC
Primary accession number P00198
Secondary accession numbers None
Integrated into Swiss-Prot on July 21, 1986
Sequence was last modified on December 1, 1992 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 75)
Name and origin of the protein
Protein name Ferredoxin
Synonyms None
Gene name None
From
Clostridium acidi-urici [TaxID: 1556] 
Taxonomy Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Protein existence 1: Evidence at protein level;
References
[1]
PROTEIN SEQUENCE.
DOI=10.1021/bi00834a035; PubMed=5799135 [NCBI, ExPASy, EBI, Israel, Japan]
Rall S.C., Bolinger R.E., Cole R.D.;
"The amino acid sequence of ferredoxin from Clostridium acidi-urici.";
Biochemistry 8:2486-2496(1969).
[2]
SEQUENCE REVISION TO 15; 21; 25 AND 28.
STRAIN=ATCC 7906 / CIP 104303 / DSM 604 / NCCB 46094 / 9a;
PubMed=8373379 [NCBI, ExPASy, EBI, Israel, Japan]
Meyer J., Moulis J.-M., Scherrer N., Gagnon J., Ulrich J.;
"Sequences of clostridial ferredoxins: determination of the Clostridium sticklandii sequence and correction of the Clostridium acidurici sequence.";
Biochem. J. 294:622-623(1993).
[3]
X-RAY CRYSTALLOGRAPHY (1.84 ANGSTROMS).
DOI=10.1016/0022-2836(94)90041-8; PubMed=7966291 [NCBI, ExPASy, EBI, Israel, Japan]
Duee E.D., Fanchon E., Vicat J., Sieker L.C., Meyer J., Moulis J.-M.;
"Refined crystal structure of the 2[4Fe-4S] ferredoxin from Clostridium acidurici at 1.84-A resolution.";
J. Mol. Biol. 243:683-695(1994).
[4]
X-RAY CRYSTALLOGRAPHY (0.94 ANGSTROMS).
DOI=10.1021/bi972155y; PubMed=9405040 [NCBI, ExPASy, EBI, Israel, Japan]
Dauter Z., Wilson K.S., Sieker L.C., Meyer J., Moulis J.-M.;
"Atomic resolution (0.94 A) structure of Clostridium acidurici ferredoxin. Detailed geometry of [4Fe-4S] clusters in a protein.";
Biochemistry 36:16065-16073(1997).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
PIR S36790; FECLCU.
3D structure databases
PDB
1FCA; X-ray; 1.80 A; A=1-55.[ExPASy / RCSB / EBI]
1FDN; X-ray; 1.84 A; A=1-55.[ExPASy / RCSB / EBI]
2FDN; X-ray; 0.94 A; A=1-55.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1FCA; -.
1FDN; -.
2FDN; -.
ModBase P00198.
Ontologies
GO
GO:0051539; Molecular function: 4 iron, 4 sulfur cluster binding (inferred from electronic annotation from UniProtKB-KW).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0022900; Biological process: electron transport chain (inferred from electronic annotation from UniProtKB-KW).
GO:0006810; Biological process: transport (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001450; 4Fe4S_Fe_S_bd.
IPR000813; 7Fe_ferredoxin.
Graphical view of domain structure.
Pfam PF00037; Fer4; 2.
Pfam graphical view of domain structure.
PRINTS PR00353; 4FE4SFRDOXIN.
PR00354; 7FE8SFRDOXIN.
PROSITE PS00198; 4FE4S_FER_1; 2.
PS51379; 4FE4S_FER_2; 2.
PROSITE graphical view of domain structure (profiles).
Other
LinkHub P00198; -.
ProtoNet P00198.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; 4Fe-4S; Direct protein sequencing; Electron transport; Iron; Iron-sulfur; Metal-binding; Repeat; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom  To Length Description FTId
CHAIN   1   55  55     Ferredoxin. PRO_0000159109
DOMAIN   2   27  26     4Fe-4S ferredoxin-type 1. 
DOMAIN   28   55  28     4Fe-4S ferredoxin-type 2. 
METAL   8    8        Iron-sulfur 1 (4Fe-4S). 
METAL   11   11        Iron-sulfur 1 (4Fe-4S). 
METAL   14   14        Iron-sulfur 1 (4Fe-4S). 
METAL   18   18        Iron-sulfur 2 (4Fe-4S). 
METAL   37   37        Iron-sulfur 2 (4Fe-4S). 
METAL   40   40        Iron-sulfur 2 (4Fe-4S). 
METAL   43   43        Iron-sulfur 2 (4Fe-4S). 
METAL   47   47        Iron-sulfur 1 (4Fe-4S). 
STRAND   2    4  3      
HELIX   15   17  3      
STRAND   27   29  3      
TURN   34   36  3      
HELIX   42   45  4      
STRAND   52   54  3      
Sequence information
Length: 55 AA [This is the length of the unprocessed precursor] Molecular weight: 5539 Da [This is the MW of the unprocessed precursor] CRC64: D038C1364A1E97E6 [This is a checksum on the sequence]
        10         20         30         40         50 
AYVINEACIS CGACEPECPV NAISSGDDRY VIDADTCIDC GACAGVCPVD APVQA 

P00198 in FASTA format

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