[1]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
STRAIN=cv. Columbia;
DOI=10.1016/S0092-8674(00)81636-0; PubMed=9845368 [NCBI, ExPASy, EBI, Israel, Japan]
Ni M.,
Tepperman J.M.,
Quail P.H.;
"PIF3, a phytochrome-interacting factor necessary for normal photoinduced signal transduction, is a novel basic helix-loop-helix protein.";
Cell 95:657-667(1998).
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[2]
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NUCLEOTIDE SEQUENCE [MRNA], INDUCTION BY UV LIGHT, GENE FAMILY, AND NOMENCLATURE.
STRAIN=cv. Columbia;
DOI=10.1093/molbev/msg088; PubMed=12679534 [NCBI, ExPASy, EBI, Israel, Japan]
Heim M.A.,
Jakoby M.,
Werber M.,
Martin C.,
Weisshaar B.,
Bailey P.C.;
"The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.";
Mol. Biol. Evol. 20:735-747(2003).
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[3]
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NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Columbia;
Lee J.,
Yi H.,
Shin B.,
Song P.-S.,
Choi G.;
"Identification and characterization of three phytochrome-associated proteins.";
Submitted (AUG-1998) to the EMBL/GenBank/DDBJ databases.
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[4]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1038/35048500; PubMed=11130712 [NCBI, ExPASy, EBI, Israel, Japan]
Theologis A.,
Ecker J.R.,
Palm C.J.,
Federspiel N.A.,
Kaul S.,
White O.,
Alonso J.,
Altafi H.,
Araujo R.,
Bowman C.L.,
Brooks S.Y.,
Buehler E.,
Chan A.,
Chao Q.,
Chen H.,
Cheuk R.F.,
Chin C.W.,
Chung M.K.,
Conn L., ![]()
Conway A.B.,
Conway A.R.,
Creasy T.H.,
Dewar K.,
Dunn P.,
Etgu P.,
Feldblyum T.V.,
Feng J.-D.,
Fong B.,
Fujii C.Y.,
Gill J.E.,
Goldsmith A.D.,
Haas B.,
Hansen N.F.,
Hughes B.,
Huizar L.,
Hunter J.L.,
Jenkins J.,
Johnson-Hopson C.,
Khan S.,
Khaykin E.,
Kim C.J.,
Koo H.L.,
Kremenetskaia I.,
Kurtz D.B.,
Kwan A.,
Lam B.,
Langin-Hooper S.,
Lee A.,
Lee J.M.,
Lenz C.A.,
Li J.H.,
Li Y.-P.,
Lin X.,
Liu S.X.,
Liu Z.A.,
Luros J.S.,
Maiti R.,
Marziali A.,
Militscher J.,
Miranda M.,
Nguyen M.,
Nierman W.C.,
Osborne B.I.,
Pai G.,
Peterson J.,
Pham P.K.,
Rizzo M.,
Rooney T.,
Rowley D.,
Sakano H.,
Salzberg S.L.,
Schwartz J.R.,
Shinn P.,
Southwick A.M.,
Sun H.,
Tallon L.J.,
Tambunga G.,
Toriumi M.J.,
Town C.D.,
Utterback T.,
Van Aken S.,
Vaysberg M.,
Vysotskaia V.S.,
Walker M.,
Wu D.,
Yu G.,
Fraser C.M.,
Venter J.C.,
Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
Nature 408:816-820(2000).
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[5]
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NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1071006; PubMed=11910074 [NCBI, ExPASy, EBI, Israel, Japan]
Seki M.,
Narusaka M.,
Kamiya A.,
Ishida J.,
Satou M.,
Sakurai T.,
Nakajima M.,
Enju A.,
Akiyama K.,
Oono Y.,
Muramatsu M.,
Hayashizaki Y.,
Kawai J.,
Carninci P.,
Itoh M.,
Ishii Y.,
Arakawa T.,
Shibata K.,
Shinagawa A.,
Shinozaki K.;
"Functional annotation of a full-length Arabidopsis cDNA collection.";
Science 296:141-145(2002).
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[6]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 12-272, AND VARIANTS ASP-124; ASN-141; HIS-176; LYS-186; LEU-209; ILE-220 AND ILE-236.
STRAIN=cv. An-2, cv. Bla-6, cv. Br-0, cv. Bu-2, cv. Columbia, cv. Di-1, cv. Et-0, cv. Kl-1, cv. Li-5:3, cv. Ma-2, cv. Mt-0, cv. Pa-2, cv. Pi-0, cv. Su-0, and cv. Tsu-1;
DOI=10.1111/j.1365-294X.2007.03298.x; PubMed=17614917 [NCBI, ExPASy, EBI, Israel, Japan]
Brock M.T.,
Tiffin P.,
Weinig C.;
"Sequence diversity and haplotype associations with phenotypic responses to crowding: GIGANTEA affects fruit set in Arabidopsis thaliana.";
Mol. Ecol. 16:3050-3062(2007).
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[7]
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FUNCTION.
DOI=10.1038/23500; PubMed=10466729 [NCBI, ExPASy, EBI, Israel, Japan]
Ni M.,
Tepperman J.M.,
Quail P.H.;
"Binding of phytochrome B to its nuclear signalling partner PIF3 is reversibly induced by light.";
Nature 400:781-784(1999).
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[8]
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FUNCTION.
DOI=10.1126/science.288.5467.859; PubMed=10797009 [NCBI, ExPASy, EBI, Israel, Japan]
Martinez-Garcia J.F.,
Huq E.,
Quail P.H.;
"Direct targeting of light signals to a promoter element-bound transcription factor.";
Science 288:859-863(2000).
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[9]
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INTERACTION WITH APRR1.
DOI=10.1093/pcp/pcf005; PubMed=11828023 [NCBI, ExPASy, EBI, Israel, Japan]
Makino S.,
Matsushika A.,
Kojima M.,
Yamashino T.,
Mizuno T.;
"The APRR1/TOC1 quintet implicated in circadian rhythms of Arabidopsis thaliana: I. Characterization with APRR1-overexpressing plants.";
Plant Cell Physiol. 43:58-69(2002).
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[10]
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GENE FAMILY, AND INTERACTION WITH PIF4.
DOI=10.1105/tpc.013839; PubMed=12897250 [NCBI, ExPASy, EBI, Israel, Japan]
Toledo-Ortiz G.,
Huq E.,
Quail P.H.;
"The Arabidopsis basic/helix-loop-helix transcription factor family.";
Plant Cell 15:1749-1770(2003).
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[11]
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INTERACTION WITH APRR1.
DOI=10.1093/pcp/pcg078; PubMed=12826627 [NCBI, ExPASy, EBI, Israel, Japan]
Yamashino T.,
Matsushika A.,
Fujimori T.,
Sato S.,
Kato T.,
Tabata S.,
Mizuno T.;
"A Link between circadian-controlled bHLH factors and the APRR1/TOC1 quintet in Arabidopsis thaliana.";
Plant Cell Physiol. 44:619-629(2003).
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