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UniProtKB/Swiss-Prot entry O70325


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name GPX41_MOUSE
Primary accession number O70325
Secondary accession numbers O35560 Q9JK35
Integrated into Swiss-Prot on January 11, 2001
Sequence was last modified on February 26, 2008 (Sequence version 4)
Annotations were last modified on    November 25, 2008 (Entry version 83)
Name and origin of the protein
Protein name Phospholipid hydroperoxide glutathione peroxidase, mitochondrial [Precursor]
Synonyms PHGPx
EC 1.11.1.12
GPX-4
Gene name
Name: Gpx4
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=CD-1;
TISSUE=Testis;
DOI=10.1016/S0378-1119(97)00321-1; PubMed=9370288 [NCBI, ExPASy, EBI, Israel, Japan]
Nam S.-Y., Nakamuta N., Kurohmaru M., Hayashi Y.;
"Cloning and sequencing of the cDNA encoding a phospholipid hydroperoxide glutathione peroxidase.";
Gene 198:245-249(1997).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=C57BL/6N;
DOI=10.1016/S0014-5793(99)00221-5; PubMed=10100845 [NCBI, ExPASy, EBI, Israel, Japan]
Borchert A., Schnurr K., Thiele B.J., Kuehn H.;
"Cloning of the mouse phospholipid hydroperoxide glutathione peroxidase gene.";
FEBS Lett. 446:223-227(1999).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
STRAIN=BALB/c, and C57BL/6J;
TISSUE=Myocardium, and Testis;
DOI=10.1007/s003359901053; PubMed=10341094 [NCBI, ExPASy, EBI, Israel, Japan]
Knopp E.A., Arndt T.L., Eng K.L., Caldwell M., LeBoeuf R.C., Deeb S.S., O'Brien K.D.;
"Murine phospholipid hydroperoxide glutathione peroxidase: cDNA sequence, tissue expression, and mapping.";
Mamm. Genome 10:601-605(1999).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=129/SvJ;
TISSUE=Liver;
DOI=10.1016/S0006-291X(03)00734-4; PubMed=12745070 [NCBI, ExPASy, EBI, Israel, Japan]
Imai H., Hirao F., Sakamoto T., Sekine K., Mizukura Y., Saito M., Kitamoto T., Hayasaka M., Hanaoka K., Nakagawa Y.;
"Early embryonic lethality caused by targeted disruption of the mouse PHGPx gene.";
Biochem. Biophys. Res. Commun. 305:278-286(2003).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J;
TISSUE=Testis;
DOI=10.1126/science.1112014; PubMed=16141072 [NCBI, ExPASy, EBI, Israel, Japan]
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J., Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
"The transcriptional landscape of the mammalian genome.";
Science 309:1559-1563(2005).
[6]
FUNCTION.
DOI=10.1016/S0891-5849(02)01360-6; PubMed=12566075 [NCBI, ExPASy, EBI, Israel, Japan]
Yant L.J., Ran Q., Rao L., Van Remmen H., Shibatani T., Belter J.G., Motta L., Richardson A., Prolla T.A.;
"The selenoprotein GPX4 is essential for mouse development and protects from radiation and oxidative damage insults.";
Free Radic. Biol. Med. 34:496-502(2003).
Comments
  • FUNCTION: Could play a major role in protecting mammals from the toxicity of ingested lipid hydroperoxides. Essential for embryonic development. Protects from radiation and oxidative damage.
  • CATALYTIC ACTIVITY: 2 glutathione + a lipid hydroperoxide = glutathione disulfide + lipid + 2 H2O.
  • SUBCELLULAR LOCATION: Mitochondrion. Cytoplasm.
  • ALTERNATIVE PRODUCTS: 3 named isoforms [FASTA] produced by alternative splicing and alternative initiation.
    NameMitochondrial
    Isoform IDO70325-1
    This is the isoform sequence displayed in this entry.
    NameNuclear
    Isoform IDQ91XR9-1
    This isoform is stored in UniProtKB/Swiss-Prot entry Q91XR9.
    NameCytoplasmic
    Isoform IDO70325-2
    Note: Produced by alternative initiation at Met-28 of isoform Mitochondrial.
    Features which should be applied to build the isoform sequence: VSP_018743.
  • TISSUE SPECIFICITY: Present primarily in testis.
  • SIMILARITY: Belongs to the glutathione peroxidase family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
D87896; BAA22780.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ012104; CAB42657.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF045768; AAC15832.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF045769; AAC15833.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF044056; AAC14560.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB030643; BAC06507.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB030643; BAC06508.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB030728; BAC06511.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK006441; BAC55251.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_032188.3; -.
UniGene Mm.359573
3D structure databases
HSSP P00435; 1GP1. [HSSP ENTRY / PDB]
SMR O70325; 36-197.
ModBase O70325.
Protein family/group databases
PeroxiBase 3714; MmGPx04-a.
3867; MmGPx04-c.
Organism-specific databases
MGI MGI:104767; Gpx4.
Gene expression databases
CleanEx MM_GPX4; -.
GermOnline ENSMUSG00000065948; Mus musculus.
Ontologies
GO
GO:0005829; Cellular component: cytosol (inferred from direct assay from MGI).
GO:0005743; Cellular component: mitochondrial inner membrane (inferred from direct assay from MGI).
GO:0005635; Cellular component: nuclear envelope (inferred from direct assay from MGI).
GO:0004602; Molecular function: glutathione peroxidase activity (inferred from direct assay from MGI).
GO:0047066; Molecular function: phospholipid-hydroperoxide glutathione peroxidase activity (inferred from electronic annotation from EC).
GO:0008430; Molecular function: selenium binding (inferred from electronic annotation from UniProtKB-KW).
GO:0006325; Biological process: establishment or maintenance of chromatin architecture (inferred from direct assay from MGI).
GO:0007275; Biological process: multicellular organismal development (inferred from electronic annotation from UniProtKB-KW).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0006979; Biological process: response to oxidative stress (inferred from electronic annotation from InterPro).
GO:0007283; Biological process: spermatogenesis (inferred from direct assay from MGI).
QuickGo view.
Family and domain databases
InterPro IPR000889; Glut_peroxidase.
IPR012335; Thioredoxin_fold.
Graphical view of domain structure.
Gene3D G3DSA:3.40.30.10; Thioredoxin_fold; 1.
PANTHER PTHR11592; Glut_peroxidase; 1.
Pfam PF00255; GSHPx; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000303; Glutathion_perox; 1.
PRINTS PR01011; GLUTPROXDASE.
PROSITE PS00460; GLUTATHIONE_PEROXID_1; 1.
PS00763; GLUTATHIONE_PEROXID_2; 1.
PS51355; GLUTATHIONE_PEROXID_3; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
Ensembl ENSMUSG00000075706; Mus musculus. [Contig view]
GeneID 625249; -.
Phylogenomic databases
HOGENOM O70325; -.
HOVERGEN O70325; -.
Other
NextBio 418158; -.
SOURCE Gpx4; Mus musculus.
ProtoNet O70325.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative initiation; Alternative splicing; Cytoplasm; Developmental protein; Mitochondrion; Oxidoreductase; Peroxidase; Selenium; Selenocysteine; Transit peptide.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
TRANSIT   1     ?        Mitochondrion (Potential). 
CHAIN   ?   197        Phospholipid hydroperoxide glutathione peroxidase, mitochondrial. PRO_0000013069
ACT_SITE   73    73         
NON_STD   73    73        Selenocysteine. 
VAR_SEQ   1    27        Missing (in isoform Cytoplasmic). VSP_018743
CONFLICT   39    39        R -> A (in Ref. 1; BAA22780). 
Sequence information
Length: 197 AA [This is the length of the unprocessed precursor] Molecular weight: 22229 Da [This is the MW of the unprocessed precursor] CRC64: 5CED4991A484F31C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSWGRLSRLL KPALLCGALA APGLAGTMCA SRDDWRCARS MHEFSAKDID GHMVCLDKYR 

        70         80         90        100        110        120 
GFVCIVTNVA SQUGKTDVNY TQLVDLHARY AECGLRILAF PCNQFGRQEP GSNQEIKEFA 

       130        140        150        160        170        180 
AGYNVKFDMY SKICVNGDDA HPLWKWMKVQ PKGRGMLGNA IKWNFTKFLI DKNGCVVKRY 

       190 
GPMEEPQVIE KDLPCYL 

O70325 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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