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UniProtKB/Swiss-Prot entry O60701


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name UGDH_HUMAN
Primary accession number O60701
Secondary accession number O60589
Integrated into Swiss-Prot on December 15, 1998
Sequence was last modified on August 1, 1998 (Sequence version 1)
Annotations were last modified on    December 16, 2008 (Entry version 70)
Name and origin of the protein
Protein name UDP-glucose 6-dehydrogenase
Synonyms UDP-Glc dehydrogenase
UDP-GlcDH
UDPGDH
EC 1.1.1.22
Gene name
Name: UGDH
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Placenta;
DOI=10.1074/jbc.273.39.25117; PubMed=9737970 [NCBI, ExPASy, EBI, Israel, Japan]
Spicer A.P., Kaback L.A., Smith T.J., Seldin M.F.;
"Molecular cloning and characterization of the human and mouse UDP-glucose dehydrogenase genes.";
J. Biol. Chem. 273:25117-25124(1998).
[2]
NUCLEOTIDE SEQUENCE.
TISSUE=Liver;
PubMed=9850599 [NCBI, ExPASy, EBI, Israel, Japan]
Peng H.L., Lou M.D., Chang M.L., Chang H.Y.;
"cDNA cloning and expression analysis of the human UDPglucose dehydrogenase.";
Proc. Natl. Sci. Counc. Repub. China, B, Life Sci. 22:166-172(1998).
[3]
NUCLEOTIDE SEQUENCE.
Chang M.L., Chang H.Y., Peng H.L.;
"Characterization of human gene encoding UDP-glucose dehydrogenase.";
Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Skin;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
NUCLEOTIDE SEQUENCE [MRNA] OF 214-388.
Raghuram V., Foskett J.K.;
Submitted (FEB-1998) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF061016; AAC36095.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ007702; CAA07609.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ272274; CAB75891.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ272275; CAB75891.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ272276; CAB75891.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ272277; CAB75891.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ272278; CAB75891.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ272279; CAB75891.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ272280; CAB75891.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ272281; CAB75891.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC022781; AAH22781.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF049126; AAC05135.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR JE0353; JE0353.
RefSeq NP_003350.1; -.
UniGene Hs.572518
3D structure databases
PDB
2Q3E; X-ray; 2.00 A; A/B/C/D/E/F/G/H/I/J/K/L=1-466.[ExPASy / RCSB / EBI]
2QG4; X-ray; 2.10 A; A/B/C/D/E/F/G/H=1-466.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 2Q3E; -.
2QG4; -.
ModBase O60701.
Protein-protein interaction databases
IntAct O60701; 2.
PTM databases
PhosphoSite O60701; -.
Enzyme and pathway databases
Reactome REACT_2063; Metabolism of xenobiotics.
2D gel databases
REPRODUCTION-2DPAGE O60701; -.
Organism-specific databases
GeneCards GC04M039176; -.
H-InvDB HIX0004163; -.
HGNC HGNC:12525; UGDH.
GenAtlas UGDH.
MIM 603370; gene. [NCBI / EBI]
PharmGKB PA37170; -.
GeneCards O60701.
Gene expression databases
ArrayExpress O60701; -.
CleanEx HS_UGDH; -.
GermOnline ENSG00000109814; Homo sapiens.
Ontologies
GO
GO:0009055; Molecular function: electron carrier activity (traceable author statement from UniProtKB).
GO:0051287; Molecular function: NAD binding (inferred from electronic annotation from InterPro).
GO:0003979; Molecular function: UDP-glucose 6-dehydrogenase activity (traceable author statement from ProtInc).
GO:0006024; Biological process: glycosaminoglycan biosynthetic process (traceable author statement from ProtInc).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0006011; Biological process: UDP-glucose metabolic process (traceable author statement from ProtInc).
GO:0006065; Biological process: UDP-glucuronate biosynthetic process (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR016040; NAD(P)-bd.
IPR017476; Nucleotide_sugar_DH.
IPR014027; UDP-Glc/GDP-Man_DHase_C.
IPR014026; UDP-Glc/GDP-Man_DHase_dimer.
IPR014028; UDP-Glc/GDP-Man_DHase_dimer-bd.
IPR001732; UDP-Glc/GDP-Man_DHase_N.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
G3DSA:3.40.50.1870; UDP-Glc/GDP-Man_DH_C; 1.
PANTHER PTHR11374; UDPG_MGDP_DH_Creg; 1.
Pfam PF00984; UDPG_MGDP_dh; 1.
PF03720; UDPG_MGDP_dh_C; 1.
PF03721; UDPG_MGDP_dh_N; 1.
Pfam graphical view of domain structure.
Proteomic databases
PeptideAtlas O60701; -.
Proteomics databases
PRIDE O60701; -.
Genome annotation databases
Ensembl ENSG00000109814; Homo sapiens. [Contig view]
GeneID 7358; -.
KEGG hsa:7358; -.
NMPDR fig|9606.3.peg.24043; -.
Phylogenomic databases
HOGENOM O60701; -.
HOVERGEN O60701; -.
Other
DrugBank DB00157; NADH.
NextBio 28812; -.
SOURCE UGDH; Homo sapiens.
ProtoNet O60701.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; NAD; Oxidoreductase; Phosphoprotein.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   494  494     UDP-glucose 6-dehydrogenase. PRO_0000074060
NP_BIND   6    23  18     NAD (By similarity). 
REGION   162   165  4     Substrate binding (By similarity). 
ACT_SITE   276   276        Nucleophile (By similarity). 
BINDING   36    36        NAD (By similarity). 
BINDING   41    41        NAD (By similarity). 
BINDING   93    93        NAD (By similarity). 
BINDING   131   131        NAD; via amide nitrogen (By similarity). 
BINDING   165   165        NAD (By similarity). 
BINDING   220   220        Substrate (By similarity). 
BINDING   273   273        Substrate; via amide nitrogen (By similarity). 
BINDING   279   279        NAD (By similarity). 
BINDING   339   339        Substrate (By similarity). 
BINDING   346   346        NAD (By similarity). 
MOD_RES   473   473        Phosphotyrosine (By similarity). 
CONFLICT   338   338        F -> V (in Ref. 5; AAC05135). 
CONFLICT   377   377        V -> A (in Ref. 5; AAC05135). 
STRAND   6    10  5      
HELIX   16    26  11      
STRAND   30    35  6      
HELIX   39    45  7      
STRAND   47    49  3      
HELIX   57    64  8      
TURN   66    68  3      
STRAND   69    73  5      
HELIX   75    81  7      
STRAND   83    87  5      
TURN   98   102  5      
HELIX   107   118  12      
STRAND   122   128  7      
HELIX   136   146  11      
STRAND   153   158  6      
HELIX   168   173  6      
STRAND   178   181  4      
HELIX   186   199  14      
TURN   200   202  3      
HELIX   205   207  3      
STRAND   208   211  4      
HELIX   213   244  32      
HELIX   248   256  9      
TURN   259   261  3      
STRAND   263   265  3      
STRAND   274   276  3      
HELIX   277   290  14      
HELIX   294   321  28      
TURN   322   324  3      
STRAND   330   334  5      
STRAND   337   339  3      
HELIX   349   359  11      
STRAND   363   367  5      
STRAND   369   371  3      
HELIX   373   380  8      
HELIX   390   394  5      
STRAND   395   397  3      
HELIX   401   405  5      
STRAND   409   413  5      
HELIX   418   422  5      
HELIX   425   431  7      
STRAND   437   442  6      
TURN   444   447  4      
HELIX   449   455  7      
STRAND   458   461  4      
Sequence information
Length: 494 AA [This is the length of the unprocessed precursor] Molecular weight: 55024 Da [This is the MW of the unprocessed precursor] CRC64: 9C9DA5E1227D65CC [This is a checksum on the sequence]
        10         20         30         40         50         60 
MFEIKKICCI GAGYVGGPTC SVIAHMCPEI RVTVVDVNES RINAWNSPTL PIYEPGLKEV 

        70         80         90        100        110        120 
VESCRGKNLF FSTNIDDAIK EADLVFISVN TPTKTYGMGK GRAADLKYIE ACARRIVQNS 

       130        140        150        160        170        180 
NGYKIVTEKS TVPVRAAESI RRIFDANTKP NLNLQVLSNP EFLAEGTAIK DLKNPDRVLI 

       190        200        210        220        230        240 
GGDETPEGQR AVQALCAVYE HWVPREKILT TNTWSSELSK LAANAFLAQR ISSINSISAL 

       250        260        270        280        290        300 
CEATGADVEE VATAIGMDQR IGNKFLKASV GFGGSCFQKD VLNLVYLCEA LNLPEVARYW 

       310        320        330        340        350        360 
QQVIDMNDYQ RRRFASRIID SLFNTVTDKK IAILGFAFKK DTGDTRESSS IYISKYLMDE 

       370        380        390        400        410        420 
GAHLHIYDPK VPREQIVVDL SHPGVSEDDQ VSRLVTISKD PYEACDGAHA VVICTEWDMF 

       430        440        450        460        470        480 
KELDYERIHK KMLKPAFIFD GRRVLDGLHN ELQTIGFQIE TIGKKVSSKR IPYAPSGEIP 

       490 
KFSLQDPPNK KPKV 

O60701 in FASTA format

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