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UniProtKB/Swiss-Prot entry O60027


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LEU3_ASHGO
Primary accession number O60027
Secondary accession numbers None
Integrated into Swiss-Prot on December 15, 1998
Sequence was last modified on August 1, 1998 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 57)
Name and origin of the protein
Protein name 3-isopropylmalate dehydrogenase
Synonyms 3-IPM-DH
IMDH
EC 1.1.1.85
Beta-IPM dehydrogenase
Gene name
Name: LEU2
OrderedLocusNames: AAL012C
From
Ashbya gossypii (Yeast) (Eremothecium gossypii) [TaxID: 33169] 
Taxonomy Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=ATCC 10895 / NRRL Y-1056 / CBS 109.51;
Mohr C., Philippsen P.;
"Isolation of the Ashbya gossypii LEU2 gene and its use as a marker gene in transformation experiments.";
Submitted (MAY-1998) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=ATCC 10895 / NRRL Y-1056 / CBS 109.51;
Revuelta J.L.;
"AgLEU2 gene.";
Submitted (AUG-1997) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 10895 / NRRL Y-1056 / CBS 109.51;
DOI=10.1126/science.1095781; PubMed=15001715 [NCBI, ExPASy, EBI, Israel, Japan]
Dietrich F.S., Voegeli S., Brachat S., Lerch A., Gates K., Steiner S., Mohr C., Poehlmann R., Luedi P., Choi S., Wing R.A., Flavier A., Gaffney T.D., Philippsen P.;
"The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome.";
Science 304:304-307(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AJ006406; CAA07006.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ001115; CAA04541.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AE016814; AAS50354.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_982530.1; -.
3D structure databases
HSSP P12010; 2AYQ. [HSSP ENTRY / PDB]
ModBase O60027.
Enzyme and pathway databases
BioCyc AGOS-XXX-01:AGOS-XXX-01-000175-MON; -.
Organism-specific databases
AGD AAL012C; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from InterPro).
GO:0003862; Molecular function: 3-isopropylmalate dehydrogenase activity (inferred from electronic annotation from InterPro).
GO:0000287; Molecular function: magnesium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0030145; Molecular function: manganese ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0009098; Biological process: leucine biosynthetic process (inferred from electronic annotation from InterPro).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR004429; 3-isopropylmalate_DHase.
IPR001804; IsoCit_IM_DHase.
Graphical view of domain structure.
Gene3D G3DSA:3.40.718.10; IDH_IMDH; 1.
PANTHER PTHR11835; IDH_IMDH_dimeric; 1.
PTHR11835:SF13; IPMDH; 1.
Pfam PF00180; Iso_dh; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00169; leuB; 1.
PROSITE PS00470; IDH_IMDH; 1.
Genome annotation databases
GeneID 4618651; -.
KEGG ago:AGOS_AAL012C; -.
NMPDR fig|33169.1.peg.175; -.
Phylogenomic databases
HOGENOM O60027; -.
Other
ProtoNet O60027.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Amino-acid biosynthesis; Branched-chain amino acid biosynthesis; Complete proteome; Cytoplasm; Leucine biosynthesis; Magnesium; Manganese; Metal-binding; NAD; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   372  372     3-isopropylmalate dehydrogenase. PRO_0000083598
NP_BIND   79    90  12     NAD (By similarity). 
NP_BIND   289   300  12     NAD (By similarity). 
METAL   225   225        Magnesium or manganese (By similarity). 
METAL   250   250        Magnesium or manganese (By similarity). 
METAL   254   254        Magnesium or manganese (By similarity). 
BINDING   97    97        Substrate (By similarity). 
BINDING   107   107        Substrate (By similarity). 
BINDING   136   136        Substrate (By similarity). 
BINDING   225   225        Substrate (By similarity). 
SITE   143   143  1     Important for catalysis (By similarity). 
SITE   192   192  1     Important for catalysis (By similarity). 
Sequence information
Length: 372 AA [This is the length of the unprocessed precursor] Molecular weight: 39309 Da [This is the MW of the unprocessed precursor] CRC64: 84C96C221B0C438D [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAAVKRIVVL PGDHIGREVV EEAVKVLGAV EQSLSDVHFD FQYHLVGGAA IDATGSALPD 

        70         80         90        100        110        120 
EALGAAKEAD AVLLGAVGGP KWQGGAVRPE QGLLKLRQEL GVYANLRPCN FAADSLLELS 

       130        140        150        160        170        180 
PLRPEIARDT DIMVVRELLG GSYFGERHED EGDGVAWDTD KYTVKEVQRI ARMAGFLALQ 

       190        200        210        220        230        240 
HDPPLPVWSL DKANVLASSR LWRKTVEETF QSEFPNVQLQ HQLIDSAAMI LVKNPRAFNG 

       250        260        270        280        290        300 
VVVTSNMFGD IISDEASVIP GSLGLLPSAS LASLPDSKSA FGLYEPCHGS APDLPAGKAN 

       310        320        330        340        350        360 
PIGCILSAAM MLKLSLNMVA AGEAVEQAVQ EVLDSGVRTG DLLGSSSTSE VGDAIALAVK 

       370 
EALRRQSAAG LS 

O60027 in FASTA format

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