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UniProtKB/Swiss-Prot entry O54753


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name H17B6_RAT
Primary accession number O54753
Secondary accession number Q5M8C8
Integrated into Swiss-Prot on September 11, 2007
Sequence was last modified on September 11, 2007 (Sequence version 2)
Annotations were last modified on    December 16, 2008 (Entry version 51)
Name and origin of the protein
Protein name Hydroxysteroid 17-beta dehydrogenase 6 [Precursor]
Synonyms EC 1.1.1.62
EC 1.1.1.63
EC 1.1.1.105
17-beta-HSD6
Oxidative 3-alpha hydroxysteroid dehydrogenase
3-alpha->beta-hydroxysteroid epimerase
3-alpha->beta-HSE
Gene name
Name: Hsd17b6
Synonyms: Hsd17b9
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, BIOPHYSICOCHEMICAL PROPERTIES, ENZYME REGULATION, INDUCTION, AND TISSUE SPECIFICITY.
TISSUE=Prostate;
DOI=10.1074/jbc.272.25.15959; PubMed=9188497 [NCBI, ExPASy, EBI, Israel, Japan]
Biswas M.G., Russell D.W.;
"Expression cloning and characterization of oxidative 17beta- and 3alpha-hydroxysteroid dehydrogenases from rat and human prostate.";
J. Biol. Chem. 272:15959-15966(1997).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Liver;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
  • FUNCTION: NAD-dependent oxidoreductase with broad substrate specificity that shows both oxidative and reductive activity (in vitro). Has retinol dehydrogenase activity towards all-trans-retinol (in vitro) (By similarity). Has 17-beta-hydroxysteroid dehydrogenase activity towards various steroids (in vitro). Converts 5-alpha-androstan-3-alpha,17-beta-diol to androsterone and estradiol to estrone (in vitro). Has 3-alpha-hydroxysteroid dehydrogenase activity towards androsterone (in vitro).
  • CATALYTIC ACTIVITY: Estradiol-17-beta + NAD(P)+ = estrone + NAD(P)H.
  • CATALYTIC ACTIVITY: Testosterone + NAD+ = androst-4-ene-3,17-dione + NADH.
  • CATALYTIC ACTIVITY: Retinol + NAD+ = retinal + NADH.
  • ENZYME REGULATION: Competitively inhibited by 9-cis-retinoic ancid and 13-cis-retinoic acid.
  • BIOPHYSICOCHEMICAL PROPERTIES:
    Kinetic parameters:   KM=0.1 µM for 5-alpha-androstan-3-alpha,17-beta-diol;
    KM=0.2 µM for androsterone;
    KM=0.5 µM for dihydrotestosterone;
    KM=1.1 µM for testosterone;
    KM=0.8 µM for estradiol;
    KM=3 µM for NAD;
    KM=1 mM for NADP;
    Vmax=2.5 nmol/min/mg enzyme for 5-alpha-androstan-3-alpha,17- beta-diol;
    Vmax=0.1 nmol/min/mg enzyme for androsterone;
    Vmax=0.5 nmol/min/mg enzyme for dihydrotestosterone;
    Vmax=1.1 nmol/min/mg enzyme for testosterone;
    Vmax=2.1 nmol/min/mg enzyme for estradiol;
    Note=Vmax was measured using transfected cell lysates;
  • SUBCELLULAR LOCATION: Microsome membrane; Peripheral membrane protein; Lumenal side (By similarity). Endoplasmic reticulum membrane; Peripheral membrane protein; Lumenal side (By similarity).
  • TISSUE SPECIFICITY: Detected in prostate, liver and kidney.
  • INDUCTION: Up-regulated by testosterone. Levels are very low in castrated male rats.
  • SIMILARITY: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U89280; AAB88253.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC088104; AAH88104.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC091114; AAH91114.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_775427.1; -.
UniGene Rn.10857
3D structure databases
HSSP P14061; 1FDS. [HSSP ENTRY / PDB]
ModBase O54753.
Organism-specific databases
RGD 708343; Hsd17b6.
Ontologies
GO
GO:0005789; Cellular component: endoplasmic reticulum membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0005792; Cellular component: microsome (inferred from electronic annotation from UniProtKB-KW).
GO:0005488; Molecular function: binding (inferred from electronic annotation from InterPro).
GO:0004303; Molecular function: estradiol 17-beta-dehydrogenase activity (inferred from electronic annotation from EC).
GO:0004745; Molecular function: retinol dehydrogenase activity (inferred from electronic annotation from EC).
GO:0050327; Molecular function: testosterone 17-beta-dehydrogenase activity (inferred from electronic annotation from EC).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0008202; Biological process: steroid metabolic process (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR002198; DHase_sc/Rdtase_SDR.
IPR002347; Glc/ribitol_DHase.
IPR016040; NAD(P)-bd.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
PANTHER PTHR19410; ADH_short_C2; 1.
Pfam PF00106; adh_short; 1.
Pfam graphical view of domain structure.
PRINTS PR00081; GDHRDH.
PR00080; SDRFAMILY.
PROSITE PS00061; ADH_SHORT; 1.
Proteomics databases
PRIDE O54753; -.
Genome annotation databases
Ensembl ENSRNOG00000007758; Rattus norvegicus. [Contig view]
GeneID 286964; -.
KEGG rno:286964; -.
Phylogenomic databases
HOVERGEN O54753; -.
Other
NextBio 625175; -.
ProtoNet O54753.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Endoplasmic reticulum; Glycoprotein; Lipid metabolism; Membrane; Microsome; NAD; Oxidoreductase; Signal; Steroid metabolism.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    17  17     Potential. 
CHAIN   18   317  300     Hydroxysteroid 17-beta dehydrogenase 6. PRO_0000303213
NP_BIND   33    57  25     NAD (By similarity). 
ACT_SITE   176   176        Proton acceptor (By similarity). 
BINDING   164   164        Substrate (Potential). 
CARBOHYD   161   161        N-linked (GlcNAc...) (Potential). 
CONFLICT   219   219        I -> S (in Ref. 1; AAB88253). 
Sequence information
Length: 317 AA [This is the length of the unprocessed precursor] Molecular weight: 36145 Da [This is the MW of the unprocessed precursor] CRC64: 4AB3F3160C6675A9 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MWFYLVTLVG LYYLLRWYRE RQVVSHLHDK YVFITGCDSG FGNLLARQLD RRGMRVLAAC 

        70         80         90        100        110        120 
LTEKGAEELK SKTSDRLETV ILDVTNTDSI SAATQWVKEH VGDKGLWGLV NNAGVFQAFA 

       130        140        150        160        170        180 
YIEWCRPEDC MSIFQVNLIG LAQVTLSMLF LVKKARGRIV NVSSVLGRVA LFGGFYSCSK 

       190        200        210        220        230        240 
YGVEAFSDVL RREIRDFGVK VSIIEPGSFK TRMTDAELII EKTKKTWEAT PEHIRESYGQ 

       250        260        270        280        290        300 
QFFDDFCNTT RRELKKCSTN LSLVTDCMEH ALTSKYPRTR YSAGWDARLF FIPLSYLPTS 

       310 
LVDCLLAISR RKPAQAV 

O54753 in FASTA format

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