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UniProtKB/Swiss-Prot entry O52582


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CDR_STAA8
Primary accession number O52582
Secondary accession number Q2FZT2
Integrated into Swiss-Prot on March 1, 2005
Sequence was last modified on January 23, 2007 (Sequence version 3)
Annotations were last modified on    December 16, 2008 (Entry version 55)
Name and origin of the protein
Protein name Coenzyme A disulfide reductase
Synonyms CoA-disulfide reductase
CoADR
EC 1.8.1.14
Gene name
Name: cdr
OrderedLocusNames: SAOUHSC_00908
From
Staphylococcus aureus (strain NCTC 8325) [TaxID: 93061] [HAMAP proteome]
Taxonomy Bacteria; Firmicutes; Bacillales; Staphylococcus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 2-15 AND 193-208.
DOI=10.1074/jbc.273.10.5752; PubMed=9488708 [NCBI, ExPASy, EBI, Israel, Japan]
delCardayre S.B., Davies J.E.;
"Staphylococcus aureus coenzyme A disulfide reductase, a new subfamily of pyridine nucleotide-disulfide oxidoreductase. Sequence, expression, and analysis of cdr.";
J. Biol. Chem. 273:5752-5757(1998).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Gillaspy A.F., Worrell V., Orvis J., Roe B.A., Dyer D.W., Iandolo J.J.;
"The Staphylococcus aureus NCTC8325 genome.";
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
[3]
CHARACTERIZATION.
DOI=10.1074/jbc.273.10.5744; PubMed=9488707 [NCBI, ExPASy, EBI, Israel, Japan]
delCardayre S.B., Stock K.P., Newton G.L., Fahey R.C., Davies J.E.;
"Coenzyme A disulfide reductase, the primary low molecular weight disulfide reductase from Staphylococcus aureus. Purification and characterization of the native enzyme.";
J. Biol. Chem. 273:5744-5751(1998).
[4]
CHARACTERIZATION, ACTIVE SITE, MUTAGENESIS OF CYS-43, AND MASS SPECTROMETRY.
DOI=10.1021/bi9825899; PubMed=10052943 [NCBI, ExPASy, EBI, Israel, Japan]
Luba J., Charrier V., Claiborne A.;
"Coenzyme A-disulfide reductase from Staphylococcus aureus: evidence for asymmetric behavior on interaction with pyridine nucleotides.";
Biochemistry 38:2725-2737(1999).
[5]
X-RAY CRYSTALLOGRAPHY (1.54 ANGSTROMS) IN COMPLEX WITH FAD AND SUBSTRATE, MUTAGENESIS OF TYR-361 AND TYR-419, AND SUBUNIT.
DOI=10.1021/bi061139a; PubMed=16981688 [NCBI, ExPASy, EBI, Israel, Japan]
Mallett T.C., Wallen J.R., Karplus P.A., Sakai H., Tsukihara T., Claiborne A.;
"Structure of coenzyme A-disulfide reductase from Staphylococcus aureus at 1.54 A resolution.";
Biochemistry 45:11278-11289(2006).
Comments
  • FUNCTION: Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide. Is also active with other disulfide substrates containing at least one 4'-phosphopantethienyl moiety such as 4,4'-diphosphopantethine, but is not able to reduce oxidized glutathione, cystine, pantethine, or H(2)O(2).
  • CATALYTIC ACTIVITY: 2 CoA + NAD(P)+ = CoA-disulfide + NAD(P)H.
  • COFACTOR: Binds 1 FAD per subunit.
  • BIOPHYSICOCHEMICAL PROPERTIES:
    Kinetic parameters:   KM=2 µM for NADPH;
    KM=11 µM for CoA disulfide;
    KM=140 µM for 3'-dephospho-CoA disulfide;
    KM=80 µM for 4,4'-diphosphopantethine;
    KM=1100 µM for CoA glutathione mixed disulfide;
    pH dependence:   Optimum pH is 7.0-8.0;
  • SUBUNIT: Homodimer.
  • DOMAIN: Contains 2 FAD binding domains and a single NADPH binding domain.
  • MASS SPECTROMETRY: Mass=49153; Method=Electrospray; Range=2-438; Source=PubMed:10052943;.
  • MISCELLANEOUS: Reduction of disulfides occurs by a thiol-disulfide exchange reaction, but involves only a single catalytic cysteine residue that forms a stable mixed disulfide with CoA during catalysis.
  • SIMILARITY: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF041467; AAB97073.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CP000253; ABD30033.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_499461.1; -.
3D structure databases
PDB
1YQZ; X-ray; 1.54 A; A/B=1-438.[ExPASy / RCSB / EBI]
PDBsum 1YQZ; -.
ModBase O52582.
Enzyme and pathway databases
BioCyc SAUR93061:SAOUHSC_00908-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from InterPro).
GO:0050451; Molecular function: CoA-disulfide reductase activity (inferred from electronic annotation from HAMAP).
GO:0050660; Molecular function: FAD binding (inferred from electronic annotation from HAMAP).
GO:0050661; Molecular function: NADP binding (inferred from electronic annotation from HAMAP).
GO:0045454; Biological process: cell redox homeostasis (inferred from electronic annotation from InterPro).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0006467; Biological process: protein thiol-disulfide exchange (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01608; -; 1.
PBIL [Tree]
InterPro IPR017758; CoA_disulphide_reductase.
IPR013027; FAD_pyr_nucl-diS_OxRdtase.
IPR001100; Pyr_nuc-diS_OxRdtase.
IPR004099; Pyr_nucl-diS_OxRdtase_dimer.
IPR001327; Pyr_OxRdtase_NAD_bd.
Graphical view of domain structure.
Gene3D G3DSA:3.30.390.30; Pyr_redox_dim; 1.
Pfam PF00070; Pyr_redox; 1.
PF07992; Pyr_redox_2; 1.
PF02852; Pyr_redox_dim; 1.
Pfam graphical view of domain structure.
PRINTS PR00368; FADPNR.
PR00411; PNDRDTASEI.
ProDom PD000139; FAD_pyr_redox; 1.
[Domain structure / List of seq. sharing at least 1 domain]
Genome annotation databases
GeneID 3920795; -.
GenomeReviews CP000253_GR; SAOUHSC_00908.
KEGG sao:SAOUHSC_00908; -.
Phylogenomic databases
HOGENOM O52582; -.
Genome annotation databases
CMR O52582; SAOUHSC_00908.
Other
ProtoNet O52582.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Complete proteome; Direct protein sequencing; FAD; Flavoprotein; NADP; Oxidoreductase; Redox-active center.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   438  437     Coenzyme A disulfide reductase. PRO_0000184688
NP_BIND   8    33  26     FAD. 
NP_BIND   151   166  16     NADP (By similarity). 
NP_BIND   267   277  11     FAD. 
ACT_SITE   43    43        Nucleophile. 
ACT_SITE   43    43        Redox-active. 
BINDING   15    15        Substrate. 
BINDING   19    19        Substrate. 
BINDING   22    22        Substrate. 
BINDING   39    39        Substrate. 
BINDING   42    42        Substrate. 
BINDING   71    71        Substrate. 
BINDING   299   299        Substrate. 
BINDING   419   419        FAD; via carbonyl oxygen. 
BINDING   427   427        Substrate. 
MUTAGEN   43    43        C->S: Loss of activity. 
MUTAGEN   361   361        Y->F: Reduces activity by 92%. Loss of activity; when associated with F-419. 
MUTAGEN   419   419        Y->F: Reduces activity by 80%. Loss of activity; when associated with F-361. 
STRAND   4     7  4      
HELIX   13    23  11      
STRAND   25    27  3      
STRAND   29    36  8      
STRAND   38    40  3      
HELIX   42    44  3      
HELIX   45    49  5      
HELIX   56    59  4      
HELIX   64    71  8      
STRAND   74    77  4      
STRAND   79    85  7      
TURN   86    89  4      
STRAND   90    95  6      
TURN   96    99  4      
STRAND   100   105  6      
STRAND   107   111  5      
STRAND   115   117  3      
HELIX   133   146  14      
STRAND   150   154  5      
HELIX   158   170  13      
STRAND   173   181  9      
HELIX   189   192  4      
HELIX   193   201  9      
STRAND   206   209  4      
STRAND   212   216  5      
STRAND   219   222  4      
STRAND   227   229  3      
STRAND   231   235  5      
STRAND   239   242  4      
HELIX   244   246  3      
STRAND   272   274  3      
HELIX   276   278  3      
STRAND   279   290  12      
HELIX   295   310  16      
STRAND   324   328  5      
STRAND   331   338  8      
HELIX   340   345  6      
STRAND   348   358  11      
STRAND   362   364  3      
STRAND   367   375  9      
TURN   376   378  3      
STRAND   380   391  12      
HELIX   392   404  13      
HELIX   410   414  5      
TURN   421   423  3      
HELIX   429   435  7      
Sequence information
Length: 438 AA [This is the length of the unprocessed precursor] Molecular weight: 49241 Da [This is the MW of the unprocessed precursor] CRC64: 3A9B643BD8D44402 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPKIVVVGAV AGGATCASQI RRLDKESDII IFEKDRDMSF ANCALPYVIG EVVEDRRYAL 

        70         80         90        100        110        120 
AYTPEKFYDR KQITVKTYHE VIAINDERQT VSVLNRKTNE QFEESYDKLI LSPGASANSL 

       130        140        150        160        170        180 
GFESDITFTL RNLEDTDAID QFIKANQVDK VLVVGAGYVS LEVLENLNER GLHPTLIHRS 

       190        200        210        220        230        240 
DKINKLMDAD MNQPILDELD KREIPYRLNE EINAINGNEI TFKSGKVEHY DMIIEGVGTH 

       250        260        270        280        290        300 
PNSKFIESSN IKLDRKGFIP VNDKFETNVP NIYAIGDIAT SHYRHVDLPA SVPLAWGAHR 

       310        320        330        340        350        360 
AASIVAEQIA GNDTIEFKGF LGNNIVKFFD YTFASVGVKP NELKQFDYKM VEVTQGAHAN 

       370        380        390        400        410        420 
YYPGNSPLHL RVYYDTSNRQ ILRAAAVGKE GADKRIDVLS MAMMNQLTVD ELTEFEVAYA 

       430 
PPYSHPKDLI NMIGYKAK 

O52582 in FASTA format

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