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UniProtKB/Swiss-Prot entry O34215

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name GADH2_PECCY
Primary accession number O34215
Secondary accession numbers None
Integrated into Swiss-Prot on January 24, 2006
Sequence was last modified on January 1, 1998 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 43)
Name and origin of the protein
Protein name Gluconate 2-dehydrogenase cytochrome c subunit [Precursor]
Synonyms GADH cytochrome c subunit
GA 2-DH cytochrome c subunit
EC 1.1.99.3
Gene name None
From
Pectobacterium cypripedii (Erwinia cypripedii) [TaxID: 55209] 
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.
Protein existence 1: Evidence at protein level;
References
[1]
 NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 20-28, AND BIOPHYSICOCHEMICAL PROPERTIES.
STRAIN=ATCC 29267 / DSM 3873 / LMG 2657 / NCPPB 3004;
PubMed=9352901 [NCBI, ExPASy, EBI, Israel, Japan]
Yum D.-Y., Lee Y.-P., Pan J.-G.;
"Cloning and expression of a gene cluster encoding three subunits of membrane-bound gluconate dehydrogenase from Erwinia cypripedii ATCC 29267 in Escherichia coli.";
J. Bacteriol. 179:6566-6572(1997).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U97665; AAC45884.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR C38575; C38575.
3D structure databases
HSSP P56534; 1C6S. [HSSP ENTRY / PDB]
ModBase O34215.
Ontologies
GO
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0033717; Molecular function: gluconate 2-dehydrogenase (acceptor) activity (inferred from electronic annotation from EC).
GO:0020037; Molecular function: heme binding (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from InterPro).
GO:0022900; Biological process: electron transport chain (inferred from electronic annotation from UniProtKB-KW).
GO:0006810; Biological process: transport (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR009056; Cyt_c_monohaem.
IPR003088; Cyt_CI.
IPR008168; Cyt_CIC.
IPR014353; Mb_AlcDHase_cyt_c.
Graphical view of domain structure.
Gene3D G3DSA:1.10.760.10; Cytochrome_c_R; 1.
Pfam PF00034; Cytochrom_C; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000018; Mb_ADH_cyt_c; 1.
PRINTS PR00605; CYTCHROMECIC.
ProDom PD011584; CytC_adh; 2.
[Domain structure / List of seq. sharing at least 1 domain]
PROSITE PS51007; CYTC; 3.
PROSITE graphical view of domain structure (profiles).
Other
ProtoNet O34215.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cell membrane; Direct protein sequencing; Electron transport; Heme; Iron; Membrane; Metal-binding; Oxidoreductase; Repeat; Signal; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    19  19      
CHAIN   20   441  422     Gluconate 2-dehydrogenase cytochrome c subunit. PRO_0000045855
DOMAIN   26   129  104     Cytochrome c 1. 
DOMAIN   173   289  117     Cytochrome c 2. 
DOMAIN   312   403  92     Cytochrome c 3. 
METAL   44    44        Iron (heme 1 axial ligand) (By similarity). 
METAL   192   192        Iron (heme 2 axial ligand) (By similarity). 
METAL   329   329        Iron (heme 3 axial ligand) (By similarity). 
BINDING   40    40        Heme 1 (covalent) (By similarity). 
BINDING   43    43        Heme 1 (covalent) (By similarity). 
BINDING   188   188        Heme 2 (covalent) (By similarity). 
BINDING   191   191        Heme 2 (covalent) (By similarity). 
BINDING   325   325        Heme 3 (covalent) (By similarity). 
BINDING   328   328        Heme 3 (covalent) (By similarity). 
Sequence information
Length: 441 AA [This is the length of the unprocessed precursor] Molecular weight: 47097 Da [This is the MW of the unprocessed precursor] CRC64: 0AF512CFA99DA123 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MMKSILALVL GTLSFAALAD DQANDALVKR GEYLARAGDC VACHSVKGGQ PFAGGLPMAT 

        70         80         90        100        110        120 
PIGTIYSTNI TPDKTTGIGD YSYDDFQKAV RHGVAKNGDT LYPAMPYPSY AVVSDEDMKA 

       130        140        150        160        170        180 
LYAYFMHGVA PVAQANKDSD IPWPLSMRWP LAIWRGVFAP DVKAFQPAAQ EDPVLARGRY 

       190        200        210        220        230        240 
LVEGLGHCGA CHTPRSITMQ EKALSNDGAH DYLSGSSAPI DGWTASNLRG DNRDGLGRWS 

       250        260        270        280        290        300 
EDDLRQFLRY GRNDHTAAFG GMTDVVEHSL QHLSDDDITA IARYLKSLGA KDASQTVFTQ 

       310        320        330        340        350        360 
DDQVAKALWK GDDSQTGASV YVDSCAACHK TDGSRLSALL PGAAWQPGGA GEPDPTSLIH 

       370        380        390        400        410        420 
IVLTGGTLPG VQGAPTAITM PAFGWRLNDQ QVADVVNFIR GSWGNGAKAT VTAKDVASLR 

       430        440 
KDETVQAHQG NADIKVLEQQ Q
O34215 in FASTA format

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