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UniProtKB/Swiss-Prot entry O29165


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ACDA1_ARCFU
Primary accession number O29165
Secondary accession numbers None
Integrated into Swiss-Prot on November 21, 2003
Sequence was last modified on January 1, 1998 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 56)
Name and origin of the protein
Protein name Acetyl-CoA decarbonylase/synthase complex subunit alpha 1
Synonyms ACDS complex subunit alpha 1
EC 1.2.99.2
ACDS complex carbon monoxide dehydrogenase 1
ACDS CODH 1
Gene name
Name: cdhA1
OrderedLocusNames: AF_1100
From
Archaeoglobus fulgidus [TaxID: 2234] [HAMAP proteome]
Taxonomy Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126;
DOI=10.1038/37052; PubMed=9389475 [NCBI, ExPASy, EBI, Israel, Japan]
Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A., Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L., Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D., Quackenbush J., Lee N.H., Sutton G.G., Gill S.R., Kirkness E.F., Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N., Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R., Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D., Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P., Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
"The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus.";
Nature 390:364-370(1997).
Comments
  • FUNCTION: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2) (By similarity).
  • CATALYTIC ACTIVITY: CO + H2O + A = CO2 + AH2.
  • COFACTOR: Binds 7 4Fe-4S clusters per heterotetramer (Potential).
  • COFACTOR: Binds 2 nickel-iron-sulfur clusters per heterotetramer (Potential).
  • SUBUNIT: Heterotetramer of two alpha and two epsilon chains. The ACDS complex is made up of alpha, epsilon, beta, gamma and delta chains with a probable stoichiometry of (alpha(2)epsilon(2))(4)-beta(8)-(gamma(1)delta(1))(8) (Potential).
  • DOMAIN: Cluster B is an all-cysteinyl-liganded 4Fe4S cluster; cluster C is a mixed Ni-Fe-S cluster which appears to be the active site of CO oxidation. Cluster D is also an all-cysteinyl-liganded 4Fe4S cluster that bridges the two subunits of the CODH dimer. May contain two additional 4Fe-4S clusters, dubbed E and F, that might reroute electron transfer along different paths.
  • SIMILARITY: Belongs to the Ni-containing carbon monoxide dehydrogenase family.
  • SIMILARITY: Contains 2 4Fe-4S ferredoxin-type domains.
  • CAUTION: This protein lacks the conserved Cys in positions 65 and 69; they are replaced by a Gln and an Asn, respectively. It is therefore possible that the C- and D-clusters are either altered or missing in this protein, which may not form heterotetramers.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE000782; AAB90136.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR C69387; C69387.
RefSeq NP_069929.1; -.
3D structure databases
ModBase O29165.
Enzyme and pathway databases
BioCyc AFUL224325:AF_1100-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from InterPro).
GO:0051539; Molecular function: 4 iron, 4 sulfur cluster binding (inferred from electronic annotation from InterPro).
GO:0018492; Molecular function: carbon-monoxide dehydrogenase (acceptor) activity (inferred from electronic annotation from HAMAP).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0016151; Molecular function: nickel ion binding (inferred from electronic annotation from InterPro).
GO:0006084; Biological process: acetyl-CoA metabolic process (inferred from electronic annotation from InterPro).
GO:0006091; Biological process: generation of precursor metabolites and energy (inferred from electronic annotation from InterPro).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01137; -; 1.
PBIL [Tree]
InterPro IPR001450; 4Fe4S_Fe_S_bd.
IPR004460; CO_DHase/Ac-CoA_synth_asu.
IPR016101; CO_DHase_a-bundle.
IPR012285; Fum_reductase_C.
IPR004137; Prismane.
IPR016099; Prismane-like_a/b-sand.
Graphical view of domain structure.
Gene3D G3DSA:1.20.1270.30; CO_DH_a-bundle; 1.
G3DSA:1.10.1060.10; Fum_reductase_C; 1.
G3DSA:3.40.50.2030; Prismane-like_a/b-sand; 2.
Pfam PF00037; Fer4; 2.
PF03063; Prismane; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00314; cdhA; 1.
PROSITE PS00198; 4FE4S_FER_1; 2.
PS51379; 4FE4S_FER_2; 2.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
GeneID 1484322; -.
GenomeReviews AE000782_GR; AF_1100.
KEGG afu:AF1100; -.
NMPDR fig|224325.1.peg.1088; -.
TIGR AF_1100; -.
Phylogenomic databases
HOGENOM O29165; -.
Other
ProtoNet O29165.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
4Fe-4S; Complete proteome; Iron; Iron-sulfur; Metal-binding; Nickel; Oxidoreductase; Repeat.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   802  802     Acetyl-CoA decarbonylase/synthase complex subunit alpha 1. PRO_0000155072
DOMAIN   395   424  30     4Fe-4S ferredoxin-type 1. 
DOMAIN   435   464  30     4Fe-4S ferredoxin-type 2. 
METAL   68    68        Iron-sulfur 1 (4Fe-4S); shared with dimeric partner (By similarity). 
METAL   71    71        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   76    76        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   86    86        Iron-sulfur 2 (4Fe-4S) (By similarity). 
METAL   243   243        Nickel-iron-sulfur (By similarity). 
METAL   271   271        Nickel-iron-sulfur (By similarity). 
METAL   310   310        Nickel-iron-sulfur (By similarity). 
METAL   405   405        Iron-sulfur 3 (4Fe-4S) (Potential). 
METAL   408   408        Iron-sulfur 3 (4Fe-4S) (Potential). 
METAL   411   411        Iron-sulfur 3 (4Fe-4S) (Potential). 
METAL   415   415        Iron-sulfur 3 (4Fe-4S) (Potential). 
METAL   444   444        Iron-sulfur 4 (4Fe-4S) (Potential). 
METAL   447   447        Iron-sulfur 4 (4Fe-4S) (Potential). 
METAL   450   450        Iron-sulfur 4 (4Fe-4S) (Potential). 
METAL   454   454        Iron-sulfur 4 (4Fe-4S) (Potential). 
METAL   512   512        Nickel-iron-sulfur (By similarity). 
METAL   541   541        Nickel-iron-sulfur (By similarity). 
METAL   576   576        Nickel-iron-sulfur (By similarity). 
Sequence information
Length: 802 AA [This is the length of the unprocessed precursor] Molecular weight: 89524 Da [This is the MW of the unprocessed precursor] CRC64: 81C626EDED06F66C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MFELKKGALF VDEMKNVSIR IGKVVEEEEE VWEEAGPTPK PGILELRKWD HKLLERYEPF 

        70         80         90        100        110        120 
YAPMQDFCNL CTMGPCDLSM NKRGACGIDL KTAKARLVTI ACCIGASAHT AHARHLVDHL 

       130        140        150        160        170        180 
IEEFGEDFPI DLGGDVNVEA PIIRTVVGIK PKTLGDLREA LNWAEKEIVK VLHSTHIGNE 

       190        200        210        220        230        240 
ESLLDYESKA MHVSMADHVG MEVADIAQIV AYNFPKAEPD TPLVDTGFGI VDKSKPTIVV 

       250        260        270        280        290        300 
VGHNVMYARP VADYLEEMGR IDDFELAGLC CTAHDMTRYN AKAKIFGPIS YQLRVIRAGI 

       310        320        330        340        350        360 
PDVMISDEQC IRADLLEACK KMGIPLIATS DAAARGLPDV SDWPVEKIVD ALVSGKLPGV 

       370        380        390        400        410        420 
FLPIPEKVGQ VAPLVAEAIF KKHGGERKYK FFESDEALME EINKCTQCMN CVFTCPHSLR 

       430        440        450        460        470        480 
VDQGMAHAQK TGDLSKLAQL EEQCLACMKC EQACPKNIKI INVIMRANYD RLYNKTGKTR 

       490        500        510        520        530        540 
VGRGPIQDTE IRKVGQPIVF GQIPGVIAAV GCINFPDEMK SIREILEEFL KRRYIVVTSG 

       550        560        570        580        590        600 
CHAMDIGMIK DEEGKTLYEK YPGNFDAGGL VNTGSCVANS HIAGAAIKIA NIFAMRPLRG 

       610        620        630        640        650        660 
NYAEIADYVL NRVGAVGFSW GPYSHKAASI ATGFNRLGVP VVVGPHGTKY RRAYIGKPWK 

       670        680        690        700        710        720 
KDKWWVYDIK SRQKVFIEPA PDSLLVAVET KEEAIVQLAR LCIRPNDTNQ GRQIKLTHYI 

       730        740        750        760        770        780 
ELHQKYYGDL PDDWAVYVRS EADLPLKMRD QLLKVLEEQY GWKIDWDKKK IVEGPVRHFD 

       790        800 
AGFNPTIVEE VYEKYAGEKA PR 

O29165 in FASTA format

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