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UniProtKB/Swiss-Prot entry O24174


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BADH_ORYSJ
Primary accession number O24174
Secondary accession number Q7F9Q3
Integrated into Swiss-Prot on December 15, 1998
Sequence was last modified on January 1, 1998 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 59)
Name and origin of the protein
Protein name Betaine aldehyde dehydrogenase
Synonyms BADH
EC 1.2.1.8
Gene name
OrderedLocusNames: Os04g0464200, LOC_Os04g39020
ORFNames: OSJNBa0060P14.8
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1046/j.1365-313X.1997.11051115.x; PubMed=9193078 [NCBI, ExPASy, EBI, Israel, Japan]
Nakamura T., Yokota S., Muramoto Y., Tsutsui K., Oguri Y., Fukui K., Takabe T.;
"Expression of a betaine aldehyde dehydrogenase gene in rice, a glycinebetaine nonaccumulator, and possible localization of its protein in peroxisomes.";
Plant J. 11:1115-1120(1997).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature01183; PubMed=12447439 [NCBI, ExPASy, EBI, Israel, Japan]
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B.;
"Sequence and analysis of rice chromosome 4.";
Nature 420:316-320(2002).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Nipponbare;
DOI=10.1126/science.1081288; PubMed=12869764 [NCBI, ExPASy, EBI, Israel, Japan]
The rice full-length cDNA consortium;
"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.";
Science 301:376-379(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB001348; BAA21098.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL663017; CAD41035.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK103582; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
PIR T03394; T03394.
RefSeq NP_001053016.1; -.
UniGene Os.26839
3D structure databases
HSSP P05091; 1O04. [HSSP ENTRY / PDB]
ModBase O24174.
Organism-specific databases
Gramene O24174; -.
Ontologies
GO
GO:0005777; Cellular component: peroxisome (inferred from electronic annotation from UniProtKB-KW).
GO:0008802; Molecular function: betaine-aldehyde dehydrogenase activity (inferred from electronic annotation from EC).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR016160; Ald_DHase_CS.
IPR016162; Ald_DHase_N.
IPR015590; Aldehyde_DHase.
Graphical view of domain structure.
Gene3D G3DSA:3.40.605.10; Aldehyde_dehydrogenase_N; 1.
PANTHER PTHR11699; Aldehyde_dehyd; 1.
Pfam PF00171; Aldedh; 1.
Pfam graphical view of domain structure.
PROSITE PS00070; ALDEHYDE_DEHYDR_CYS; 1.
PS00687; ALDEHYDE_DEHYDR_GLU; 1.
Genome annotation databases
GeneID 4336081; -.
KEGG osa:4336081; -.
Other
ProtoNet O24174.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
NAD; Oxidoreductase; Peroxisome.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   505  505     Betaine aldehyde dehydrogenase. PRO_0000056530
NP_BIND   240   245  6     NAD (By similarity). 
MOTIF   503   505  3     Microbody targeting signal (Potential). 
ACT_SITE   262   262        By similarity. 
ACT_SITE   296   296        By similarity. 
Sequence information
Length: 505 AA [This is the length of the unprocessed precursor] Molecular weight: 54648 Da [This is the MW of the unprocessed precursor] CRC64: 85EFA42B059A8081 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAAPSAIPRR GLFIGGGWRE PSLGRRLPVV NPATEATIGD IPAATAEDVE LAVSAARDAF 

        70         80         90        100        110        120 
GRDGGRHWSR APGAVRAKYL KAIAAKIKDK KSYLALLETL DSGKPLDEAA GDMEDVAACF 

       130        140        150        160        170        180 
EYYADLAEAL DGKQRAPISL PMENFESYVL KEPIGVVGLI TPWNYPLLMA TWKVAPALAA 

       190        200        210        220        230        240 
GCTAVLKPSE LASLTCLELG GICAEIGLPP GVLNIITGLG TEAGAPLASH PHVDKIAFTG 

       250        260        270        280        290        300 
STETGKRIMI TASQMVKPVS LELGGKSPLI VFDDVDIDKA VEWAMFGCFA NAGQVCSATS 

       310        320        330        340        350        360 
RLLLHEKIAK RFLDRLVAWA KSIKISDPLE EGCRLGSVVS EGQYQKIMKF ISTARCEGAT 

       370        380        390        400        410        420 
ILYGGARPQH LKRGFFIEPT IITNVSTSMQ IWREEVFGPV ICVKEFRTER EAVELANDTH 

       430        440        450        460        470        480 
YGLAGAVISN DLERCERISK AIQSGIVWIN CSQPCFVQAP WGGNKRSGFG RELGQWGLDN 

       490        500 
YLSVKQVTKY CSDEPYGWYR PPSKL 

O24174 in FASTA format

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