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UniProtKB/Swiss-Prot entry O03524


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name COX1_DRONO
Primary accession number O03524
Secondary accession numbers None
Integrated into Swiss-Prot on December 15, 1998
Sequence was last modified on July 1, 1997 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 53)
Name and origin of the protein
Protein name Cytochrome c oxidase subunit 1 [Fragment]
Synonyms EC 1.9.3.1
Cytochrome c oxidase polypeptide I
Gene name
Name: MT-CO1
Synonyms: COI, COXI, MTCO1
From
Dromaius novae-hollandiae (Emu) [TaxID: 8790] 
Encoded on Mitochondrion.
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Lee K., Feinstein J., Cracraft J.;
"Phylogenetic relationships of the ratite birds: resolving conflicts between molecular and morphological data sets.";
(In) Mindell D.P. (eds.); Avian molecular evolution and systematics, pp.1-1, Academic Press, New York (1997).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U76059; AAB61319.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
HSSP P18401; 1FFT. [HSSP ENTRY / PDB]
SMR O03524; 3-337.
ModBase O03524.
Ontologies
GO
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from InterPro).
GO:0005746; Cellular component: mitochondrial respiratory chain (inferred from electronic annotation from UniProtKB-KW).
GO:0005507; Molecular function: copper ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0004129; Molecular function: cytochrome-c oxidase activity (inferred from electronic annotation from EC).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0020037; Molecular function: heme binding (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from InterPro).
GO:0009060; Biological process: aerobic respiration (inferred from electronic annotation from InterPro).
GO:0022900; Biological process: electron transport chain (inferred from electronic annotation from UniProtKB-KW).
GO:0006810; Biological process: transport (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR000883; COX1.
Graphical view of domain structure.
Gene3D G3DSA:1.20.210.10; COX1; 1.
PANTHER PTHR10422; COX1; 1.
Pfam PF00115; COX1; 1.
Pfam graphical view of domain structure.
PRINTS PR01165; CYCOXIDASEI.
PROSITE PS50855; COX1; 1.
PS00077; COX1_CUB; 1.
PROSITE graphical view of domain structure (profiles).
Phylogenomic databases
HOVERGEN O03524; -.
Other
ProtoNet O03524.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Copper; Electron transport; Heme; Iron; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; Oxidoreductase; Respiratory chain; Transmembrane; Transport.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   >337  >337     Cytochrome c oxidase subunit 1. PRO_0000183326
TRANSMEM   18     38  21     Potential. 
TRANSMEM   64     84  21     Potential. 
TRANSMEM   103    123  21     Potential. 
TRANSMEM   146    166  21     Potential. 
TRANSMEM   184    204  21     Potential. 
TRANSMEM   235    255  21     Potential. 
TRANSMEM   269    289  21     Potential. 
TRANSMEM   311    331  21     Potential. 
METAL   62     62        Iron (heme A axial ligand) (Probable). 
METAL   241    241        Copper B (Probable). 
METAL   245    245        Copper B (Probable). 
METAL   291    291        Copper B (Probable). 
METAL   292    292        Copper B (Probable). 
CROSSLNK   241    245        1'-histidyl-3'-tyrosine (His-Tyr) (By similarity). 
NON_TER   337    337         
Sequence information
Length: 337 AA [This is the length of the partial sequence of the unprocessed precursor] Molecular weight: 36786 Da [This is the MW of the partial sequence of the unprocessed precursor] CRC64: 662D7FDD03F7BE02 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MTFITRWFFS TNHKDIGTLY LIFGAWAGMV GTALSLLIRA ELGQPGTLLG DDQIYNVVVT 

        70         80         90        100        110        120 
AHAFVMIFFM VMPVMIGGFG NWLVPLMIGA PDMAFPRMNN MSFWLLPPSF LLLLASSTVE 

       130        140        150        160        170        180 
AGAGTGWTVY PPLAGNLAHA GASVDLAIFS LHLAGVSSIL GAINFITTAI NMKPPALTQY 

       190        200        210        220        230        240 
QTPLFVWSVL ITAILLLLSL PVLAAGITML LTDRNLNTTF FDPAGGGDPV LYQHLFWFFG 

       250        260        270        280        290        300 
HPEVYILILP GFGMISHVVT YYAGKKEPFG YMGMVWAMLS IGFLGFIVWA HHMFTVGMDV 

       310        320        330 
DTRAYFTSAT MIIAIPTGIK VFSWLATLHG GTIKWDP 

O03524 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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