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UniProtKB/Swiss-Prot entry A5FHX5


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name RLMF_FLAJ1
Primary accession number A5FHX5
Secondary accession numbers None
Integrated into Swiss-Prot on September 2, 2008
Sequence was last modified on June 12, 2007 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 13)
Name and origin of the protein
Protein name Ribosomal RNA large subunit methyltransferase F
Synonyms EC 2.1.1.48
23S rRNA mA1618 methyltransferase
rRNA adenine N-6-methyltransferase
Gene name
Name: rlmF
OrderedLocusNames: Fjoh_2174
From
Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [TaxID: 376686] [HAMAP proteome]
Taxonomy Bacteria; Bacteroidetes; Flavobacteria; Flavobacteriales; Flavobacteriaceae; Flavobacterium.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P.;
"Complete sequence of Flavobacterium johnsoniae UW101.";
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000685; ABQ05202.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001194521.1; -.
3D structure databases
ModBase A5FHX5.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0008988; Molecular function: rRNA (adenine-N6-)-methyltransferase activity (inferred from electronic annotation from HAMAP).
GO:0006364; Biological process: rRNA processing (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01848; -; 1.
PBIL [Tree]
InterPro IPR016909; S-AdoMet-dep_MeTrfase_YbiN_prd.
IPR010286; SAM-Mtase_prd.
Graphical view of domain structure.
PANTHER PTHR13393; DUF890; 1.
Pfam PF05971; Methyltransf_10; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF029038; Mtase_YbiN_prd; 1.
Genome annotation databases
GeneID 5092793; -.
GenomeReviews CP000685_GR; Fjoh_2174.
CMR A5FHX5; Fjoh_2174.
Other
ProtoNet A5FHX5.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Methyltransferase; rRNA processing; S-adenosyl-L-methionine; Transferase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   316  316     Ribosomal RNA large subunit methyltransferase F. PRO_0000349916
Sequence information
Length: 316 AA [This is the length of the unprocessed precursor] Molecular weight: 35867 Da [This is the MW of the unprocessed precursor] CRC64: 60D45F1506CDF5C8 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MKAENNSQKD NLHPRNLHRS RYDFELLISN CPELKAFISI NKHGIETVDF SNPLAVKTLN 

        70         80         90        100        110        120 
KALLQTYYDI QNWDIPKNYL CPPIPGRADY IHYLADLLAE TNNGKIPEGN SVMGLDIGTG 

       130        140        150        160        170        180 
ANLIYPILGN SIYNWSFVAT DIYKTSIENA SKIIEANPRL IDAVSLQQQT EPRFIFKNII 

       190        200        210        220        230        240 
IPEDRFTFTM CNPPFHASAE EANKSTSRKV SNLNPKEKKN TNPVLNFGGQ NAELWCNGGE 

       250        260        270        280        290        300 
IGFITQMIYE SVKYASQVLW FTTLVSKKEN LSSIYKTLKK VNAVSVKTIE MSQGQKNSRI 

       310 
VAWSFLNNTE QKSWKF 

A5FHX5 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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