ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry A5EIE6

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name SYD_BRASB
Primary accession number A5EIE6
Secondary accession numbers None
Integrated into Swiss-Prot on January 15, 2008
Sequence was last modified on June 12, 2007 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 14)
Name and origin of the protein
Protein name Aspartyl-tRNA synthetase
Synonyms EC 6.1.1.12
Aspartate--tRNA ligase
AspRS
Gene name
Name: aspS
OrderedLocusNames: BBta_3864
From
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) [TaxID: 288000] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1139548; PubMed=17540897 [NCBI, ExPASy, EBI, Israel, Japan]
Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.-C., Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z., Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.-S., Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., Sadowsky M.;
"Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia.";
Science 316:1307-1312(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000494; ABQ35940.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001239846.1; -.
3D structure databases
ModBase A5EIE6.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004815; Molecular function: aspartate-tRNA ligase activity (inferred from electronic annotation from HAMAP).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from HAMAP).
GO:0003676; Molecular function: nucleic acid binding (inferred from electronic annotation from InterPro).
GO:0006422; Biological process: aspartyl-tRNA aminoacylation (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00044; -; 1.
PBIL [Tree]
InterPro IPR004364; aa-tRNA-synt_II.
IPR006195; aa-tRNA-synth_II.
IPR002312; Asp-tRNA-synth_IIb.
IPR004524; Asp-tRNA-synth_IIb_bac/mito.
IPR004115; GAD.
IPR012340; NA-bd_OB-fold.
IPR004365; NA_bd_OB_tRNA-helicase.
Graphical view of domain structure.
Gene3D G3DSA:2.40.50.140; OB_NA_bd_sub; 1.
PANTHER PTHR22594; aa-tRNA-synt_II; 1.
PTHR22594:SF5; AspS_bac; 1.
Pfam PF02938; GAD; 1.
PF00152; tRNA-synt_2; 1.
PF01336; tRNA_anti; 1.
Pfam graphical view of domain structure.
PRINTS PR01042; TRNASYNTHASP.
TIGRFAMs TIGR00459; aspS_bact; 1.
PROSITE PS50862; AA_TRNA_LIGASE_II; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
GeneID 5150013; -.
GenomeReviews CP000494_GR; BBta_3864.
KEGG bbt:BBta_3864; -.
CMR A5EIE6; BBta_3864.
Other
ProtoNet A5EIE6.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm; Ligase; Nucleotide-binding; Protein biosynthesis.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   590  590     Aspartyl-tRNA synthetase. PRO_1000006641
Sequence information
Length: 590 AA [This is the length of the unprocessed precursor] Molecular weight: 66606 Da [This is the MW of the unprocessed precursor] CRC64: 512DE030B649AF4D [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MHRYRTHTCG ALRDSNIGET VRLSGWCHRI RDHGGVLFVD LRDHYGITQC VVDPDSKAFG 

        70         80         90        100        110        120 
LAEKLRSEWV VRMEGKVRRR PEGTDNAELP TGQVELYVAD IEVLGPAAEL PLPVFGEQEY 

       130        140        150        160        170        180 
PEDIRLKYRF LDLRREKLHQ NIMTRGAIID SMRRRMKEQG FFEFQTPILT ASSPEGARDF 

       190        200        210        220        230        240 
LVPSRIHPGK FYALPQAPQQ YKQLLMMSGF DRYFQIAPCF RDEDPRADRL PGEFYQLDVE 

       250        260        270        280        290        300 
MSFVEQEDVF AAMEPVITGV FEDFAKGKPV TKGWPRIPFA EALRKYGTDK PDLRNPIEMQ 

       310        320        330        340        350        360 
DVSEHFRGSG FKVFARMLED TKNQVWAIPA PGGGSRAFCD RMNSWAQGEG QPGLGYIMWR 

       370        380        390        400        410        420 
EGGEGAGPLA NNIGPERTAA IRTQLGTKEG DAAFFVAGDP EKFWKFAGLA RTKVGEELNL 

       430        440        450        460        470        480 
IDKDRFALAW IVDFPMYEYN EDDKKVDFSH NPFSMPQGGL EALQTKDPLT IKAFQYDIAC 

       490        500        510        520        530        540 
NGYEIASGGI RNHKPEAMVK AFEIAGYGEQ EVVDRFGGMY RAFQYGAPPH GGMAAGVDRI 

       550        560        570        580        590 
VMLLCGTTNL REISLFPMNQ QAMDLLMGAP SEATTKQLRE LHIRTNLPNK
A5EIE6 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by kr flag YPRC Korea Mirror sites: Australia Brazil Canada China Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!