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UniProtKB/Swiss-Prot entry A4XPI5

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BETA_PSEMY
Primary accession number A4XPI5
Secondary accession numbers None
Integrated into Swiss-Prot on January 15, 2008
Sequence was last modified on May 29, 2007 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 12)
Name and origin of the protein
Protein name Choline dehydrogenase
Synonyms CHD
CDH
EC 1.1.99.1
Gene name
Name: betA
OrderedLocusNames: Pmen_0481
From
Pseudomonas mendocina (strain ymp) [TaxID: 399739] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Detter J.C., Bruce D., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Hersman L., Dubois J., Maurice P., Richardson P.;
"Complete sequence of Pseudomonas mendocina ymp.";
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000680; ABP83251.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001185983.1; -.
3D structure databases
ModBase A4XPI5.
Ontologies
GO
GO:0008812; Molecular function: choline dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0050660; Molecular function: FAD binding (inferred from electronic annotation from InterPro).
GO:0006066; Biological process: cellular alcohol metabolic process (inferred from electronic annotation from InterPro).
GO:0019285; Biological process: glycine betaine biosynthetic process from choline (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_00750; -; 1.
PBIL [Tree]
InterPro IPR011533; Choline_dehydrogenase.
IPR012132; GMC_OxRdtase.
IPR000172; GMC_OxRdtase_N.
IPR007867; GMC_OxRtase_C.
Graphical view of domain structure.
Pfam PF05199; GMC_oxred_C; 1.
PF00732; GMC_oxred_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000137; Alcohol_oxidase; 1.
TIGRFAMs TIGR01810; betA; 1.
PROSITE PS00623; GMC_OXRED_1; 1.
PS00624; GMC_OXRED_2; 1.
Genome annotation databases
GeneID 5108400; -.
GenomeReviews CP000680_GR; Pmen_0481.
KEGG pmy:Pmen_0481; -.
CMR A4XPI5; Pmen_0481.
Other
ProtoNet A4XPI5.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   565  565     Choline dehydrogenase. PRO_1000046569
NP_BIND   6    35  30     FAD (Probable). 
ACT_SITE   475   475        By similarity. 
Sequence information
Length: 565 AA [This is the length of the unprocessed precursor] Molecular weight: 62252 Da [This is the MW of the unprocessed precursor] CRC64: AAFF3254370B986D [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MSHEFDYIII GAGSAGNVLA TRLTEDADVS VLLLEAGGPD YRLDFRTQMP AALAFPLQGR 

        70         80         90        100        110        120 
RYNWAYETDP EPHMNNRRME CGRGKGLGGS SLINGMCYIR GNALDFDNWA KAKGLEDWTY 

       130        140        150        160        170        180 
HDCLPYFRKA ESRDIGPNDY HGGDGPVSVT TPKAGNNPLF HAMVEAGVQA GYPRTDDLNG 

       190        200        210        220        230        240 
YQQEGFGPMD RTVTPQGRRA STARGYLDQA RERPNLTIVT HATTDRILFD GKRASGVSYL 

       250        260        270        280        290        300 
IGNANDATEA RARREVLLCA GAIASPQILQ RSGVGPAALL RELDIALVHE LPGVGQNLQD 

       310        320        330        340        350        360 
HLEMYLQYAC TQPVSLYPAL KLLNQPGIGA QWLFTGNGIG ASNQFEAGGF IRTRPEFAWP 

       370        380        390        400        410        420 
NIQFHFLPVA INYNGSNAVN EHGFQAHVGS MRSPSRGRIQ LKSKDPRQHP SILFNYMSHE 

       430        440        450        460        470        480 
QDWQEFRDAI RITREIMAQP ALDSYRGREI SPGIDCQSDA ELDAFIREHA ETAFHPSCSC 

       490        500        510        520        530        540 
KMGEDDMAVV DGQGRVHGVQ GLRVVDASIM PEIITGNLNA TTIMMAEKIA DRIRDRQPLP 

       550        560 
RSNAPYFVAG ERPVRGQPQR AVSAA
A4XPI5 in FASTA format

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