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UniProtKB/Swiss-Prot entry A2YQT7


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name G3PC_ORYSI
Primary accession number A2YQT7
Secondary accession numbers Q42977 Q6ZK60
Integrated into Swiss-Prot on July 10, 2007
Sequence was last modified on March 20, 2007 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 12)
Name and origin of the protein
Protein name Glyceraldehyde-3-phosphate dehydrogenase, cytosolic
Synonyms EC 1.2.1.12
PP38
Gene name
Name: GAPC
Synonyms: GPC
ORFNames: OsI_026680
From
Oryza sativa subsp. indica (Rice) [TaxID: 39946] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Guang-Lu-Ai No.4;
TISSUE=Shoot;
Xiao C., Jiang Y., Cao K.;
"A cDNA encoding the GAPDH from rice.";
Submitted (SEP-1995) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. 93-11;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U31676; AAA82047.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000133; EAZ05448.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
HSSP P56649; 1IHX. [HSSP ENTRY / PDB]
ModBase A2YQT7.
Organism-specific databases
Gramene Q42977; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from UniProtKB-KW).
GO:0004365; Molecular function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (inferred from electronic annotation from InterPro).
GO:0051287; Molecular function: NAD binding (inferred from electronic annotation from InterPro).
GO:0006096; Biological process: glycolysis (inferred from electronic annotation from UniProtKB-KW).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR000173; GlycerAld_3-P_DHase.
IPR006424; Glyceraldehyde-3-P_DHase_1.
Graphical view of domain structure.
PANTHER PTHR10836; GAP_DH; 1.
Pfam PF02800; Gp_dh_C; 1.
PF00044; Gp_dh_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000149; GAP_DH; 1.
PRINTS PR00078; G3PDHDRGNASE.
TIGRFAMs TIGR01534; GAPDH-I; 1.
PROSITE PS00071; GAPDH; 1.
ProtoNet A2YQT7.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cytoplasm; Glycolysis; NAD; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed (By similarity). 
CHAIN   2   337  336     Glyceraldehyde-3-phosphate dehydrogenase, cytosolic. PRO_0000295025
NP_BIND   13    14  2     NAD (By similarity). 
REGION   153   155  3     Glyceraldehyde 3-phosphate binding (By similarity). 
REGION   213   214  2     Glyceraldehyde 3-phosphate binding (By similarity). 
ACT_SITE   154   154        Nucleophile (By similarity). 
BINDING   35    35        NAD (By similarity). 
BINDING   82    82        NAD; via carbonyl oxygen (By similarity). 
BINDING   184   184        Glyceraldehyde 3-phosphate (By similarity). 
BINDING   236   236        Glyceraldehyde 3-phosphate (By similarity). 
BINDING   318   318        NAD (By similarity). 
SITE   181   181  1     Activates thiol group during catalysis (By similarity). 
CONFLICT   111   112        AA -> SS (in Ref. 1; AAA82047). 
CONFLICT   122   122        V -> F (in Ref. 1; AAA82047). 
Sequence information
Length: 337 AA [This is the length of the unprocessed precursor] Molecular weight: 36413 Da [This is the MW of the unprocessed precursor] CRC64: 3A8154CF7A06A603 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGKIKIGING FGRIGRLVAR VALQSEDVEL VAVNDPFITT DYMTYMFKYD TVHGQWKHSD 

        70         80         90        100        110        120 
IKIKDSKTLL LGEKPVTVFG IRNPDEIPWA EAGAEYVVES TGVFTDKEKA AAHLKGGAKK 

       130        140        150        160        170        180 
VVISAPSKDA PMFVCGVNED KYTSDIDIVS NASCTTNCLA PLAKVIHDNF GIIEGLMTTV 

       190        200        210        220        230        240 
HAITATQKTV DGPSSKDWRG GRAASFNIIP SSTGAAKAVG KVLPDLNGKL TGMSFRVPTV 

       250        260        270        280        290        300 
DVSVVDLTVR IEKAASYDAI KSAIKSASEG KLKGIIGYVE EDLVSTDFVG DSRSSIFDAK 

       310        320        330 
AGIALNDNFV KLVAWYDNEW GYSNRVIDLI RHMAKTQ 

A2YQT7 in FASTA format

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