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UniProtKB/Swiss-Prot entry A1S1I8


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name FADB_SHEAM
Primary accession number A1S1I8
Secondary accession numbers None
Integrated into Swiss-Prot on February 5, 2008
Sequence was last modified on February 6, 2007 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 20)
Name and origin of the protein
Protein name Fatty acid oxidation complex subunit alpha
Synonyms None
Includes Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase
     (EC 4.2.1.17)
     (EC 5.3.3.8)
     (EC 5.1.2.3)
3-hydroxyacyl-CoA dehydrogenase
     (EC 1.1.1.35)
Gene name
Name: fadB
OrderedLocusNames: Sama_0032
From
Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) [TaxID: 326297] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Fredrickson J., Richardson P.;
"Complete sequence of Shewanella amazonensis SB2B.";
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000507; ABL98244.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_925914.1; -.
3D structure databases
ModBase A1S1I8.
Ontologies
GO
GO:0016507; Cellular component: fatty acid beta-oxidation multienzyme complex (inferred from electronic annotation from InterPro).
GO:0003857; Molecular function: 3-hydroxyacyl-CoA dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0008692; Molecular function: 3-hydroxybutyryl-CoA epimerase activity (inferred from electronic annotation from HAMAP).
GO:0050662; Molecular function: coenzyme binding (inferred from electronic annotation from InterPro).
GO:0004165; Molecular function: dodecenoyl-CoA delta-isomerase activity (inferred from electronic annotation from HAMAP).
GO:0004300; Molecular function: enoyl-CoA hydratase activity (inferred from electronic annotation from HAMAP).
GO:0009062; Biological process: fatty acid catabolic process (inferred from electronic annotation from InterPro).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01621; -; 1.
PBIL [Tree]
InterPro IPR006180; 3-OHacyl-CoA_DHase_CS.
IPR006176; 3-OHacyl-CoA_DHase_NAD-bd.
IPR006108; 3HC_DHase_C.
IPR001753; Crotonase_core.
IPR013328; DHase_multihelical.
IPR012799; FadB.
IPR016040; NAD(P)-bd.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
G3DSA:1.10.1040.10; Opine_DH; 1.
Pfam PF00725; 3HCDH; 1.
PF02737; 3HCDH_N; 1.
PF00378; ECH; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR02437; FadB; 1.
PROSITE PS00067; 3HCDH; 1.
PS00166; ENOYL_COA_HYDRATASE; FALSE_NEG.
ProtoNet A1S1I8.
Genome annotation databases
GeneID 4602289; -.
GenomeReviews CP000507_GR; Sama_0032.
KEGG saz:Sama_0032; -.
NMPDR fig|326297.7.peg.28; -.
CMR A1S1I8; Sama_0032.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Fatty acid metabolism; Isomerase; Lipid degradation; Lipid metabolism; Lyase; Multifunctional enzyme; NAD; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   716  716     Fatty acid oxidation complex subunit alpha. PRO_1000069572
REGION   1   188  188     Enoyl-CoA hydratase/isomerase (By similarity). 
REGION   310   716  407     3-hydroxyacyl-CoA dehydrogenase (By similarity). 
Sequence information
Length: 716 AA [This is the length of the unprocessed precursor] Molecular weight: 76369 Da [This is the MW of the unprocessed precursor] CRC64: 93251CB6B0C3D409 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MIYQSPTIQV ELTADKIARL CFNAPGSVNK FDRETLASLN AALDVLKDSD AKAAVLTSGK 

        70         80         90        100        110        120 
DTFIVGADIT EFLALFAEED AKLMEWIAQA NVVFNKLEDL PFPTVSAIKG FALGGGCEAI 

       130        140        150        160        170        180 
LATDFRVADT SAKIGLPETK LGLIPGFGGT VRLPRLIGAD NALEWITTGK DQRPEDALKV 

       190        200        210        220        230        240 
GAIDAVVAPE NLEAAAIQML NDALAGKLDW QARRARKQAP LTLPKLEAMM SFTTAKGMVY 

       250        260        270        280        290        300 
AVAGKHYPAP MAAVSVVEQA AGMSRAEALV VEHNAFIKLA KTDVATALIG IFLNDQLVKG 

       310        320        330        340        350        360 
KAKKASKLAK DIKHAAVLGA GIMGGGIAYQ SASKGTPIVM KDINQAALDL GVNEAAKLLS 

       370        380        390        400        410        420 
AQVARGRSTP DKMAKVLNNI TPALDYAPLK DVNVVVEAVV ENPKVKAMVL ADVENVVADD 

       430        440        450        460        470        480 
AIIASNTSTI SIDLLAKSLK NPARFCGMHF FNPVHKMPLV EVIRGKDTSE ETVASVVAYA 

       490        500        510        520        530        540 
SKMGKTPIVV NDCPGFFVNR VLFPYFAGFN GLLADGGDFA AIDKVMEKQF GWPMGPAYLL 

       550        560        570        580        590        600 
DVVGLDTGHH AQAVMADGFP DRMGKSDKDA IDVMYEAGRL GQKNGKGFYQ YSIDKRGKPK 

       610        620        630        640        650        660 
KDVDPASYTM LAEAFGAQKA FEADEIIART MIPMIIETVR CLEEGIVASP AEADMGLVYG 

       670        680        690        700        710 
LGFPPFRGGV FRYLDTMGVA NFVALADKYA HLGGLYQVTD AMRELASNNG SYYPKA 

A1S1I8 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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