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HAMAP: Thermoplasma acidophilum complete proteome

General information

Species:  Thermoplasma acidophilum
Species code: THEAC
Taxonomy: Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma (TaxID: 2303) [NEWT/ NCBI]
Description: Thermoacidophilic archaeon that thrives at 59 degrees Celsius and pH 2 which was isolated from self-heating coal refuse piles and solfatara fields. Does not possess a cell wall but is delimited only by a plasma membrane. Inhabits a hot and highly acidic environment sometimes as low as pH 0.5. Adapted to scavenging nutrients from the decomposition of organisms killed by the acidity.
Properties: Presence of flagella: Yes
Interaction: No
Number of membranes: 1
Number of inteins: 1
Statistics: Number of THEAC entries in the UniProt Knowledgebase: 1482 (321 in UniProtKB/Swiss-Prot + 1161 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 25905 / AMRC-C165 / DSM 1728 / IFO 15155 / JCM 9062
Genome structure
Chromosome EMBL accession number AL139299 (circular; 1,564,906 bp) (download entry) (download Genome Reviews).
References
[1] MEDLINE=20479972; PubMed=11029001; [ NCBI , EBI , Israel , Japan ]
Ruepp A., Graml W., Santos-Martinez M.-L., Koretke K.K., Volker C., Mewes H.-W., Frishman D., Stocker S., Lupas A.N., Baumeister W. ;
"The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum.";
Nature 407:508-513(2000).
Web links
Official genome site(s):
http://wwwex.biochem.mpg.de/baumeister/genome/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Archaea&GLgenus=Thermoplasma&GLspecies=acidophilum&GLstrain=DSM1728
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Taci_DSM1728
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/archaea/Thermoplasma_acidophilum.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p110_The_acido
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntta01
EBI Proteome Analysis page
Karyn's Genomes



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