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HAMAP: Dehalococcoides ethenogenes (strain 195) complete proteome

General information

Species:  Dehalococcoides ethenogenes (strain 195)
Species code: DEHE1
Taxonomy: Bacteria; Chloroflexi; Dehalococcoidetes; Dehalococcoides (TaxID: 243164) [NEWT/ NCBI]
Description: Dehalococcoides species are strictly aerobic bacteria that catabolize several of the most toxic and persistent chlorinated aromatics and aliphatics by reductive dechlorination and are used for in situ bioremediation of contaminated sites. D.ethenogenes is able to reductively dechlorinate tetrachloroethene (PCE) and trichloroethene (TCE) to ethene. TCE and PCE are used as industrial cleaners and because of their disposal after use are amongst the most pervasive organic groundwater pollutants. Strain 195 was derived from an anaerobic sewage digestor. Its genome contains 17 genes coding for putative reductive dehalogenases. It was reported that strain 195 did not react with a peptidoglycan-specific lectin and that its ultrastructure resembled S-layer from Archaea (Maymo-Gatell et al., 1997).
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 1
Number of inteins:0
Statistics: Number of DEHE1 entries in the UniProt Knowledgebase: 1502 (238 in UniProtKB/Swiss-Prot + 1264 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    195
Genome structure:
Chromosome EMBL accession number CP000027 (circular; 1,469,720 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=15637277; [ NCBI , EBI , Israel , Japan ]
Seshadri R., Adrian L., Fouts D.E., Eisen J.A., Phillippy A.M., Methe B.A., Ward N.L., Nelson W.C., DeBoy R.T., Khouri H.M., Kolonay J.F., Dodson R.J., Daugherty S.C., Brinkac L.M., Sullivan S.A., Madupu R., Nelson K.E., Kang K.H., Impraim M., Tran K., Robinson J.M., Forberger H.A., Fraser C.M., Zinder S.H., Heidelberg J.F. ;
"Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes.";
Science 307:105-108(2005).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Dehalococcoides&GLspecies=ethenogenes&GLstrain=195
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid243164%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Deth_195
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p214_Deh_ethen
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=gde
 EBI Proteome Analysis page



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