ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
Search for

HAMAP: Bacillus subtilis complete proteome

General information

Species:  Bacillus subtilis
Species code: BACSU
Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus (TaxID: 1423) [NEWT/ NCBI]
Description: Gram-positive harmless bacterium. It is capable of producing endospores resistant to adverse environmental conditions such as heat and desiccation and is widely used for the production of enzymes and specialty chemicals.
Properties: Presence of flagella: Yes
Interaction: No
Number of membranes: 1
Number of inteins: 1
Statistics: Number of BACSU entries in the UniProt Knowledgebase: 4105 (2829 in UniProtKB/Swiss-Prot + 1276 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    168
Genome structure:
Chromosome EMBL accession number AL009126 (circular; 4,214,630 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=98044033; PubMed=9384377; [ NCBI , EBI , Israel , Japan ]
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A. ;
"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.";
Nature 390:249-256(1997).
Web links:
Official genome site(s):
http://genolist.pasteur.fr/SubtiList/
Other web sites:
BSORF: http://bacillus.genome.jp/
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Bacillus&GLspecies=subtilis&GLstrain=168
DTBS: http://elmo.ims.u-tokyo.ac.jp/dbtbs/
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid224308%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Bsub_168
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Bacillus_subtilis.html
Micado: http://locus.jouy.inra.fr/cgi-bin/genmic/madbase/progs/madbase.operl
NRSub: http://pbil.univ-lyon1.fr/nrsub/nrsub.html
Pathema: http://pathema.jcvi.org/cgi-bin/Bacillus/shared/GenomePage.cgi?org=ntbs01
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p76_Bac_subti
Sub-2D: http://microbio2.biologie.uni-greifswald.de:8880/
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntbs01
 EBI Proteome Analysis page
 UniProtKB/Swiss-Prot document



Tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
 Hosted by kr flag YPRC Korea Mirror sites: Australia  Brazil  Canada  China  Switzerland
Search for