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HAMAP: Aeropyrum pernix complete proteome

General information

Species:  Aeropyrum pernix
Species code: AERPE
Taxonomy: Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum (TaxID: 56636) [NEWT/ NCBI]
Description: A strictly aerobic hyperthermophilic archaeon isolated from a coastal solfataric thermal vent at Kodakara-Jima Island, Japan in 1993. It is a heterotroph that grows optimally at 90 to 95 degrees Celsius, pH 7.0, and a salinity of 3.5%. It is spherical shaped and covered by a cell envelope (S-layer-like structure). It contains C25-isopranyl archaeol (glycerol diether) as the hydrocarbon chain in the core lipid.
Properties: Presence of flagella: not known
Interaction: No
Number of membranes: 1
Number of inteins: 1
Statistics: Number of AERPE entries in the UniProt Knowledgebase: 1702 (359 in UniProtKB/Swiss-Prot + 1343 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    K1
Genome structure:
Chromosome EMBL accession number BA000002 (circular; 1,669,696 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=99310339; PubMed=10382966; [ NCBI , EBI , Israel , Japan ]
Kawarabayasi Y., Hino Y., Horikawa H., Yamazaki S., Haikawa Y., Jin-no K., Takahashi M., Sekine M., Baba S., Ankai A., Kosugi H., Hosoyama A., Fukui S., Nagai Y., Nishijima K., Nakazawa H., Takamiya M., Masuda S., Funahashi T., Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kubota K., Nakamura Y., Nomura N., Sako Y., Kikuchi H. ;
"Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1.";
DNA Res. 6:83-101(1999).
Web links:
Official genome site(s):
http://www.bio.nite.go.jp/dogan/MicroTop?GENOME_ID=ape_G1
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid272557%5Borgn%5D
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/project.php?pid=211
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Aper_K1
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/archaea/Aeropyrum_pernix.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p211_Aer_perni
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntap01
 EBI Proteome Analysis page



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